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Files are described in detail in their associated README documents.
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GO Annotations File |
The gene_association.aspgd file contains the Aspergillus nidulans Gene Ontology (GO) curation from AspGD. Please note that this file contains ALL of the AspGD GO curation for Aspergillus nidulans, whereas the gene_association file that is available on the GO consortium (GOC) web site, http://www.geneontology.org/, has been filtered according to GOC guidelines. The gene_association.A_fumigatus_Af293 file contains predicted GO annotations for A. fumigatus Af293 that were assigned computationally based on orthology to Saccharomyces cerevisiae and Aspergillus nidulans.
Download the File|View the README
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Chromosomal Feature File |
The chromosomal_feature file contains information such as names and aliases (synonyms), descriptions, and any S. cerevisiae orthologs for the chromosomal features (including protein-encoding and non-coding genes) in AspGD.
Download the File|View the README
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Phenotype Annotations File |
The A_nidulans_phenotype_data.tab
file contains all of the mutant phenotype annotations in AspGD.
Download the File|View the README
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Sequence Files |
Chromosome, ORF, protein, and intergenic sequence files for several Aspergillus and related strains and species are available for download from this directory. Current sequence data and archived sequence data from previous assemblies of the genome sequence are available.
Go to the Sequence Download
Directory|View the
README
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GFF files |
This directory contains files with information about the features in AspGD and features in historic versions of the genome assembly in Generic Feature Format (GFF), which is the format used for display in the GBrowse Genome Browser in AspGD.
Go to the Directory|View the README
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Orthologs and Best Hits |
The Orthologs directory contains
the mappings between Aspergillus nidulans genes and the predicted
orthologs in S. cerevisiae and A. fumigatus Af293, and mappings between A. fumigatus Af293 and the predicted
orthologs in S. cerevisiae, as well as the raw input
and output files from the InParanoid ortholog
computation. The Best Hits
directory contains mappings between to S. cerevisiae
genes at a level of similarity below
that required by the strict criteria used to determine orthology.
Go to the Orthologs
Directory|Go to the Best Hits
Directory
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Protein Domain Predictions |
Output of
IprScan domain predictions for all AspGD proteins.
Go to the Domains Directory|
View the README
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Images and Movies |
Still images and movies that have been submitted to AspGD to be made available for public download.
Go to the Directory|View the README
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| Batch
Download Tool |
Simultaneous retrieval of
multiple types of data for a list of gene or feature names
Go to the Batch
Download Tool page
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Browse Downloads |
Browse the Download directories on the AspGD web site.
Go to the top-level directory
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