| Reference | Literature Topic | Species | Genes Addressed |
|---|
Terabayashi Y, et al. (2012) Conserved and specific responses to hypoxia in Aspergillus oryzae and Aspergillus nidulans determined by comparative transcriptomics. Appl Microbiol Biotechnol 93(1):305-17
   | Genomic expression study | A. nidulans | |AN0330 |AN0868 |AN1149 |AN1689 |AN3030 |AN3429 |AN5775 |AN5913 |AN6088 |AN7141 |AN7295 |AN8616 |AN8764 |AN9303 |MORE |
| | A. oryzae | |AO090003000024 |AO090003000661 |AO090003000751 |AO090003001055 |AO090005001196 |AO090005001358 |AO090009000219 |AO090009000557 |AO090011000306 |AO090011000755 |AO090011000766 |AO090012000675 |AO090020000048 |AO090020000195 |MORE |
Abadio AK, et al. (2011) Comparative genomics allowed the identification of drug targets against human fungal pathogens. BMC Genomics 12:75
| Computational analysis | A. fumigatus | |Afu1g02210 |Afu1g02550 |Afu2g01450 |Afu2g05420 |Afu2g06190 |Afu2g09710 |Afu2g11150 |Afu2g11780 |Afu2g12980 |Afu2g17050 |Afu3g09910 |Afu3g14320 |Afu4g06250 |Afu4g08070 |MORE |
Cagas SE, et al. (2011) Profiling the Aspergillus fumigatus proteome in response to caspofungin. Antimicrob Agents Chemother 55(1):146-54
| Large-scale protein detection, Genomic expression study | A. fumigatus | |Afu1g04530 |Afu1g05080 |Afu1g12250 |Afu3g06970 |Afu3g08460 |Afu3g12300 |Afu4g03880 |Afu4g07730 |Afu4g10800 |Afu5g01990 |Afu5g05630 |Afu6g12660 |Afu6g12990 |Afu6g13550 |MORE |
Cagas SE, et al. (2011) The Proteomic Signature of Aspergillus fumigatus During Early Development. Mol Cell Proteomics 10(11):M111.010108
| Large-scale protein detection | A. fumigatus | |Afu1g01490 |Afu1g02070 |Afu1g02550 |Afu1g03510 |Afu1g03970 |Afu1g04070 |Afu1g04320 |Afu1g04530 |Afu1g04620 |Afu1g04660 |Afu1g05040 |Afu1g05080 |Afu1g05340 |Afu1g05390 |MORE |
Franken AC, et al. (2011) Heme biosynthesis and its regulation: towards understanding and improvement of heme biosynthesis in filamentous fungi. Appl Microbiol Biotechnol 91(3):447-60
| Other genomic analysis | A. niger | |An01g04250 |An01g08640 |An07g02200 |An07g10040 |An08g00010 |An08g10680 |An11g01580 |An11g09700 |An15g02690 |An17g01480 |An18g02970 |
Freitas JS, et al. (2011) Transcription of the Hsp30, Hsp70, and Hsp90 heat shock protein genes is modulated by the PalA protein in response to acid pH-sensing in the fungus Aspergillus nidulans. Cell Stress Chaperones 16(5):565-72
| Other genomic analysis | A. nidulans | |AN0465 |AN0493 |AN0646 |AN0752 |AN10416 |AN1049 |AN11096 |AN1851 |AN1964 |AN2282 |AN2367 |AN2734 |AN2998 |AN3431 |MORE |
Gautam P, et al. (2011) Transcriptomic and Proteomic Profile of Aspergillus fumigatus on Exposure to Artemisinin. Mycopathologia 172(5):331-46
| Genomic expression study | A. fumigatus | |Afu1g02580 |Afu1g04540 |Afu1g05870 |Afu1g06610 |Afu1g12040 |Afu1g12290 |Afu1g12350 |Afu1g12560 |Afu1g14300 |Afu2g04060 |Afu2g05450 |Afu2g07790 |Afu2g09130 |Afu2g11990 |MORE |
Hartmann T, et al. (2011) Oligopeptide transport and regulation of extracellular proteolysis are required for growth of Aspergillus fumigatus on complex substrates but not for virulence. Mol Microbiol 82(4):917-35
| Genomic expression study | A. fumigatus | |Afu1g00420 |Afu1g01680 |Afu1g05960 |Afu1g09120 |Afu1g12240 |Afu1g14530 |Afu1g14920 |Afu2g00220 |Afu2g01250 |Afu2g08790 |Afu2g17330 |Afu3g01220 |Afu3g08290 |Afu4g00370 |MORE |
Jain R, et al. (2011) The MAP kinase MpkA controls cell wall integrity, oxidative stress response, gliotoxin production and iron adaptation in Aspergillus fumigatus. Mol Microbiol 82(1):39-53
| Genomic expression study | A. fumigatus | |Afu2g04190 |Afu3g03280 |Afu3g03390 |Afu3g03520 |Afu3g14810 |Afu4g00610 |Afu4g03600 |Afu5g07320 |Afu5g14190 |Afu8g06030 |abp2 |aspf13 |aspf34 |cat1 |MORE |
Khalaj V, et al. (2011) Annexin C4 in A. Fumigatus: A proteomics approach to understand the function. J Proteomics 74(10):1950-8
| Large-scale protein detection | A. fumigatus | |Afu1g03100 |Afu1g05340 |Afu1g07630 |Afu1g11130 |Afu1g16840 |Afu2g03010 |Afu2g15430 |Afu3g06190 |Afu3g06880 |Afu3g08580 |Afu3g11510 |Afu4g13120 |Afu4g13580 |Afu5g01440 |MORE |
Kim Y, et al. (2011) Autophagy induced by rapamycin and carbon-starvation have distinct proteome profiles in Aspergillus nidulans. Biotechnol Bioeng 108(11):2705-15
| Large-scale protein detection | A. nidulans | |AN2237 |AN6048 |AN6630 |AN7298 |AN7316 |AN7914 |AN8223 |agdB |aldA |artA |bglA |cdc37 |nmt1 |pho8 |MORE |
Morton CO, et al. (2011) The temporal dynamics of differential gene expression in Aspergillus fumigatus interacting with human immature dendritic cells in vitro. PLoS One 6(1):e16016
| Genomic expression study | A. fumigatus | |Afu1g02730 |Afu1g09750 |Afu1g13110 |Afu1g13160 |Afu1g13800 |Afu1g14540 |Afu1g14880 |Afu1g16550 |Afu2g00720 |Afu2g01440 |Afu2g04060 |Afu2g05550 |Afu2g05560 |Afu2g09860 |MORE |
Nazir KH, et al. (2011) Construction and application of a functional library of cytochrome P450 monooxygenases from the filamentous fungus Aspergillus oryzae. Appl Environ Microbiol 77(9):3147-50
| Other genomic analysis | A. oryzae | |CYP5042A2 |CYP504A8 |CYP504B6 |CYP5053C1 |CYP505A3 |CYP5061B5 |CYP5068A2 |CYP5068B1 |CYP5070A1 |CYP5075A1 |CYP5075B1 |CYP5076C1 |CYP5078A5 |CYP5080B2 |MORE |
Nutzmann HW, et al. (2011) Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation. Proc Natl Acad Sci U S A 108(34):14282-7
| Large-scale phenotype analysis | A. nidulans | |AN6209 |AN6214 |adaB |elp3 |esa1 |gcnE |gnaA |ngn1 |ngn10 |ngn11 |ngn12 |ngn13 |ngn14 |ngn15 |MORE |
O'Hanlon KA, et al. (2011) Targeted Disruption of Nonribosomal Peptide Synthetase pes3 Augments the Virulence of Aspergillus fumigatus. Infect Immun 79(10):3978-92
| Large-scale protein detection | A. fumigatus | |Afu1g00480 |Afu1g03510 |Afu1g10570 |Afu1g12890 |Afu1g15020 |Afu3g03020 |Afu3g09590 |Afu4g03760 |Afu4g07710 |Afu4g12730 |Afu5g04330 |Afu5g10610 |Afu6g13300 |act1 |MORE |
Ohno A, et al. (2011) A carrier fusion significantly induces unfolded protein response in heterologous protein production by Aspergillus oryzae. Appl Microbiol Biotechnol 92(6):1197-206
| Genomic expression study | A. oryzae | |hacA |
Oosthuizen JL, et al. (2011) Dual Organism Transcriptomics of Airway Epithelial Cells Interacting with Conidia of Aspergillus fumigatus. PLoS One 6(5):e20527
| Genomic expression study | A. fumigatus | |Afu1g14710 |Afu2g00310 |Afu2g00970 |Afu2g01210 |Afu2g01450 |Afu2g02470 |Afu2g02680 |Afu2g02940 |Afu2g03300 |Afu2g03490 |Afu2g03590 |Afu2g03610 |Afu2g04990 |Afu2g05790 |MORE |
Pusztahelyi T, et al. (2011) Comparison of transcriptional and translational changes caused by long-term menadione exposure in Aspergillus nidulans. Fungal Genet Biol 48(2):92-103
| Large-scale protein detection | A. nidulans | |AN0046 |AN0179 |AN0297 |AN0895 |AN1003 |AN10098 |AN10219 |AN10223 |AN10260 |AN10298 |AN1084 |AN10981 |AN11094 |AN1409 |MORE |
Ruger-Herreros C, et al. (2011) Regulation of Conidiation by Light in Aspergillus nidulans. Genetics 188(4):809-22
| Genomic expression study | A. nidulans | |AN0045 |AN0190 |AN0367 |AN0693 |AN1131 |AN3304 |AN3872 |AN4299 |AN5004 |AN5056 |AN5353 |AN5764 |AN7558 |AN8018 |MORE |
Sharma M, et al. (2011) Evaluation of Glycosyl Hydrolases in the Secretome of Aspergillus fumigatus and Saccharification of Alkali-Treated Rice Straw. Appl Biochem Biotechnol 163(5):577-91
| Large-scale protein detection | A. fumigatus | |Afu1g17220 |Afu2g00650 |Afu2g00920 |Afu2g17620 |Afu3g02090 |Afu6g00770 |Afu6g01800 |Afu7g06140 |Afu7g06150 |aspHS |cbhB |dppV |msdS |nagA |
Vodisch M, et al. (2011) Analysis of the Aspergillus fumigatus Proteome Reveals Metabolic Changes and the Activation of the Pseurotin A Biosynthesis Gene Cluster in Response to Hypoxia. J Proteome Res 10(5):2508-2524
| Large-scale protein detection | A. fumigatus | |Afu1g02670 |Afu1g04540 |Afu1g04620 |Afu1g06960 |Afu1g08810 |Afu1g10630 |Afu1g12170 |Afu1g17110 |Afu2g03010 |Afu2g04310 |Afu2g13010 |Afu2g14270 |Afu2g15290 |Afu3g01580 |MORE |
Wartenberg D, et al. (2011) Secretome analysis of Aspergillus fumigatus reveals Asp-hemolysin as a major secreted protein. Int J Med Microbiol 301(7):602-11
| Large-scale protein detection | A. fumigatus | |Afu1g02290 |Afu1g04130 |Afu1g09470 |Afu1g15780 |Afu1g16250 |Afu2g00690 |Afu2g00760 |Afu2g02100 |Afu2g05240 |Afu2g09790 |Afu2g10660 |Afu3g00840 |Afu3g01530 |Afu3g06830 |MORE |
Yang X, et al. (2011) Identification and proteomic analysis of a novel gossypol-degrading fungal strain. J Sci Food Agric
| Large-scale protein detection | A. niger | |An01g04240 |An01g09270 |An02g03460 |An04g04130 |An16g07410 |An17g00210 |actA |citA |gpdA |hexA |met6 |nmt1 |nmt2 |pda1 |MORE |
de Bekker C, et al. (2011) Single cell transcriptomics of neighboring hyphae of Aspergillus niger. Genome Biol 12(8):R71
| Genomic expression study | A. niger | |An01g04640 |An01g07250 |An01g10030 |An01g11270 |An02g03730 |An02g06050 |An02g08020 |An02g10450 |An02g13840 |An03g04280 |An04g03530 |An04g08710 |An04g09550 |An06g00990 |MORE |
de Oliveira JM, et al. (2011) Proteomic analysis of the secretory response of Aspergillus niger to D-maltose and D-xylose. PLoS One 6(6):e20865
| Large-scale protein detection | A. niger | |An01g03460 |An01g10580 |An01g14730 |An02g04690 |An04g08730 |An05g01860 |An07g02360 |An08g01900 |An10g00800 |An18g01320 |aamA |abfB |abnC |agdA |MORE |
de Souza WR, et al. (2011) Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse. Biotechnol Biofuels 4:40
| Large-scale protein detection | A. niger | |An01g03340 |An01g03780 |An01g11670 |An01g14600 |An02g00140 |An05g00480 |An07g03160 |An07g07630 |An08g01710 |An08g09380 |An11g00200 |An11g06090 |An12g01850 |An12g02220 |MORE |
Albrecht D, et al. (2010) Integrative analysis of the heat shock response in Aspergillus fumigatus. BMC Genomics 11:32
| Large-scale protein detection, Genomic expression study | A. fumigatus | |Afu1g02030 |Afu1g02550 |Afu1g05610 |Afu1g10130 |Afu2g10660 |Afu2g11260 |Afu2g13010 |Afu2g13240 |Afu2g13530 |Afu3g08580 |Afu3g09230 |Afu3g09320 |Afu4g03410 |Afu4g04680 |MORE |
Asif AR, et al. (2010) Analysis of the cellular Aspergillus fumigatus proteome that reacts with sera from rabbits developing an acquired immunity after experimental aspergillosis. Electrophoresis 31(12):1947-58
| Large-scale protein detection | A. fumigatus | |Afu1g05080 |Afu1g11190 |Afu1g15020 |Afu2g01010 |Afu2g03610 |Afu2g09210 |Afu3g05370 |Afu3g09290 |Afu3g09320 |Afu3g11690 |Afu4g06620 |Afu4g10410 |Afu5g06240 |Afu5g07120 |MORE |
Braaksma M, et al. (2010) An inventory of the Aspergillus niger secretome by combining in silico predictions with shotgun proteomics data. BMC Genomics 11:584
| Large-scale protein localization, Large-scale protein detection | A. nidulans | |pelA |pgxB |
| | A. niger | |An01g00370 |An01g01750 |An02g02540 |An02g03070 |An02g04690 |An02g09050 |An03g01010 |An03g06220 |An06g00190 |An08g01710 |An08g07350 |An12g05960 |An13g02130 |An14g02150 |MORE |
Ferreira de Oliveira JM, et al. (2010) Shotgun proteomics of Aspergillus niger microsomes upon D-xylose induction. Appl Environ Microbiol 76(13):4421-9
| Large-scale protein detection | A. niger | |An01g02500 |An01g03820 |An01g06060 |An01g12810 |An01g13220 |An04g02070 |An04g02470 |An04g07440 |An04g09170 |An05g00140 |An07g04190 |An07g07760 |An07g09990 |An08g04480 |MORE |
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