A. niger An02g13920 Summary

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Summary
Locus History Literature Gene Ontology Phenotype Protein
      
An02g13920 BASIC INFORMATION [ View References ]
Systematic Name, Reference Strain An02g13920 (A. niger CBS 513.88)
Systematic Names Used in Other Strains 37575-mRNA (A. niger ATCC 1015)
Feature Type ORF, Uncharacterized
Description Ortholog(s) have ubiquitin-specific protease activity, role in protein deubiquitination and cytosol, nucleus localization (1)
Orthologous genes in Aspergillus species A. oryzae RIB40 Ortholog(s) : AO090001000670
A. fumigatus Af293 Ortholog(s) : Afu2g05590
A. nidulans FGSC A4 Ortholog(s) : AN7491
View ortholog cluster : 21 genes among 21 Aspergillus-related species/strains
View alignment
Ortholog(s) in non-AspGD species N. crassa (NCU06372) ; C. albicans (C1_06390W_A) ; S. pombe (uch1) ; S. cerevisiae (YUH1)
Chromosomal Location
GBrowse for A. niger CBS 513.88
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An02g13920
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GO Annotations View all An02g13920 GO evidence and references

  Molecular Function
 
    Computational * thiol-dependent ubiquitin-specific protease activity (IEA with S. pombe: uch1, S. cerevisiae: YUH1)

  Biological Process
 
    Computational * protein deubiquitination (IEA with S. pombe: uch1)
* ubiquitin-dependent protein catabolic process (IEA with EBI: IPR001578)

  Cellular Component
 
    Computational * cytosol (IEA with S. pombe: uch1)
* nucleus (IEA with S. pombe: uch1)
Sequence Information Collapse An02_A_niger_CBS_513_88:3363121 to 3363954 | GBrowse
  Last Update Coordinates: 2011-08-18 | Sequence: 2011-08-18

  Subfeature Details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Update
CoordinatesSequence
5' UTR-86to-13,363,035to3,363,1202013-07-302013-07-30
CDS1to523,363,121to3,363,1722011-08-182011-08-18
Intron53to1333,363,173to3,363,2532011-08-182011-08-18
CDS134to8343,363,254to3,363,9542011-08-182011-08-18
3' UTR835to9513,363,955to3,364,0712011-08-192011-08-19

Retrieve Sequences
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RNA-Seq Data JBrowse
External Links FungiDB | GenBank (1, 2) | TrEMBL
Primary AspGDID ASPL0000225222
ADDITIONAL INFORMATION for An02g13920
Locus HistoryGene/Sequence Resources
LOCUS SUMMARY NOTES for An02g13920
Information from the GenBank record :
  • db_xref = GI:134057468, GOA:A2QFB2
  • inference = profile:PFAM:PF01088
  • protein_id = CAK37976.1
  • EC_number = 3.1.2.15
  • note = unnamed protein product; Catalytic activity: ubiquitin C-terminal thiolester + H(2)O = ubiquitin + a thiol.; Complex: the interaction between YUH1 and the yeast ubiquitin protein has been studied by heteronuclear multidimensional NMR spectroscopy.; Function: YUH1, a cysteine protease that catalyzes the removal of ubiquitin C-terminal adducts, is important for the generation of monomeric ubiquitin.; Remark: YUH1 acts on esters formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin.; Remark: the release of ubiquitin from attachment to other proteins and adducts is critical for ubiquitin biosynthesis, proteasomal degradation and other cellular processes.; Similarity: YUH1 is member of the UCH (ubiquitin C-terminal hydrolase) family of enzymes.; Title: strong similarity to ubiquitin thiolesterase Yuh1 - Saccharomyces cerevisiae; cytoplasm

Last Updated: 2011-08-19

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for An02g13920]
1)AspGD (2011) Description lines for gene products, based on orthologs and predicted Gene Ontology (GO) annotations.
AspGD Papers Entry  


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