A. niger An03g00500 Summary

Summary

Locus History

An03g00500 BASIC INFORMATION [ View References ]

Systematic Name, Reference Strain

An03g00500 (A. niger CBS 513.88)

Systematic Names Used in Other Strains

45801-mRNA (A. niger ATCC 1015)

Feature Type

ORF, Uncharacterized

Description

Ortholog(s) have glucan endo-1,6-beta-glucosidase activity (1)

Orthologous genes in Aspergillus species

A. fumigatus Af293 Ortholog(s) : Afu8g07120/neg1
View ortholog cluster : 18 genes among 16 Aspergillus-related species/strains
View alignment

Ortholog(s) in non-AspGD species

N. crassa (neg-1)

Chromosomal Location

GBrowse for A. niger CBS 513.88
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An03g00500

GO Annotations		View all An03g00500 GO evidence and references
Molecular Function
Computational		glucan endo-1,6-beta-glucosidase activity (IEA with N. crassa: neg-1, A. fumigatus: neg1) glucosylceramidase activity (IEA with EBI: IPR001139)
Biological Process
Computational		carbohydrate metabolic process (IEA with EBI: IPR013781) sphingolipid metabolic process (IEA with EBI: IPR001139)
Cellular Component
Manually curated		cellular_component unknown (ND)

Sequence Information

An03_A_niger_CBS_513_88:104387 to 102859 | GBrowse
Note: this feature is encoded on the Crick strand.

Last Update

Coordinates: 2011-08-18 | Sequence: 2011-08-18

Subfeature Details

	Relative Coordinates			Chromosomal Coordinates			Most Recent Update
	Relative Coordinates			Chromosomal Coordinates			Coordinates	Sequence
5' UTR	-25	to	-1	104,412	to	104,388	2013-07-30	2013-07-30
CDS	1	to	865	104,387	to	103,523	2013-07-30	2013-07-30
Intron	866	to	918	103,522	to	103,470	2013-07-30	2013-07-30
CDS	919	to	1529	103,469	to	102,859	2013-07-30	2013-07-30
3' UTR	1530	to	1981	102,858	to	102,407	2013-07-30	2013-07-30

Retrieve Sequences
Sequence Analysis Tools
Maps & Displays

RNA-Seq Data

External Links

FungiDB | GenBank (1, 2) | TrEMBL

Primary AspGDID

ASPL0000224130

ADDITIONAL INFORMATION for An03g00500

Locus History

Gene/Sequence Resources

LOCUS SUMMARY NOTES for An03g00500

Information from the GenBank record :

db_xref = GI:134057627, GOA:A2QFR7, UniProtKB/TrEMBL:A2QFR7
inference = profile:COGS:COG5520
protein_id = CAK38027.1
EC_number = 3.2.1.-
note = unnamed protein product; Function: the matched protein from A. fumigatus is related to a enzyme of microbial origin which cleaves disaccharide glycosides, in particular beta-primeveroside.; Title: strong similarity to diglycosidase related protein SEQ ID NO:10 from patent WO200018931-A1 -Aspergillus fumigatus

Last Updated: 2011-08-19

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for An03g00500]

1)	AspGD (2011) Description lines for gene products, based on orthologs and predicted Gene Ontology (GO) annotations.

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To cite AspGD, please use the following reference: Cerqueira GC, Arnaud MB, Inglis DO, Skrzypek MS, Binkley G, Simison M, Miyasato SR, Binkley J, Orvis J, Shah P, Wymore F, Sherlock G, Wortman JR (2014). The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations. Nucleic Acids Res 42 (1); D705-10; see How to cite AspGD.