AspGD Curated Papers

Author(s)	Citation
Gsaller F, Hortschansky P, Furukawa T, Carr PD, Rash B, Capilla J, Muller C, Bracher F, Bowyer P, Haas H, Brakhage AA, Bromley MJ	*Gsaller F, et al.* (2016)** Sterol Biosynthesis and Azole Tolerance Is Governed by the Opposing Actions of SrbA and the CCAAT Binding Complex. PLoS Pathog 12(7):e1005775
Bromley M, Johns A, Davies E, Fraczek M, Mabey Gilsenan J, Kurbatova N, Keays M, Kapushesky M, Gut M, Gut I, Denning DW, Bowyer P	*Bromley M, et al.* (2016)** Mitochondrial Complex I Is a Global Regulator of Secondary Metabolism, Virulence and Azole Sensitivity in Fungi. PLoS One 11(7):e0158724
Sakko M, Moore C, Novak-Frazer L, Rautemaa V, Sorsa T, Hietala P, Jarvinen A, Bowyer P, Tjaderhane L, Rautemaa R	*Sakko M, et al.* (2014)** 2-hydroxyisocaproic acid is fungicidal for Candida and Aspergillus species. Mycoses 57(4):214-21
Bromley MJ, van Muijlwijk G, Fraczek MG, Robson G, Verweij PE, Denning DW, Bowyer P	*Bromley MJ, et al.* (2014)** Occurrence of azole-resistant species of Aspergillus in the UK environment. J Glob Antimicrob Resist 2(4):276-279
Bowyer P, Denning DW	Bowyer P and Denning DW (2014) Environmental fungicides and triazole resistance in Aspergillus. Pest Manag Sci 70(2):173-8
Rizzetto L, Giovannini G, Bromley M, Bowyer P, Romani L, Cavalieri D	*Rizzetto L, et al.* (2013)** Strain dependent variation of immune responses to A. fumigatus: definition of pathogenic species. PLoS One 8(2):e56651
Howard SJ, Pasqualotto AC, Anderson MJ, Leatherbarrow H, Albarrag AM, Harrison E, Gregson L, Bowyer P, Denning DW	*Howard SJ, et al.* (2013)** Major variations in Aspergillus fumigatus arising within aspergillomas in chronic pulmonary aspergillosis. Mycoses 56(4):434-41
Fraczek MG, Bromley M, Buied A, Moore CB, Rajendran R, Rautemaa R, Ramage G, Denning DW, Bowyer P	*Fraczek MG, et al.* (2013)** The cdr1B efflux transporter is associated with non-cyp51a-mediated itraconazole resistance in Aspergillus fumigatus. J Antimicrob Chemother 68(7):1486-96
Denning DW, Bowyer P	Denning DW and Bowyer P (2013) Voriconazole resistance in Aspergillus fumigatus: should we be concerned? Clin Infect Dis 57(4):521-3
Buied A, Moore CB, Denning DW, Bowyer P	*Buied A, et al.* (2013)** High-level expression of cyp51B in azole-resistant clinical Aspergillus fumigatus isolates. J Antimicrob Chemother 68(3):512-4
Mabey Gilsenan J, Cooley J, Bowyer P	*Mabey Gilsenan J, et al.* (2012)** CADRE: the Central Aspergillus Data REpository 2012. Nucleic Acids Res 40(Database issue):D660-6
Farnell E, Rousseau K, Thornton DJ, Bowyer P, Herrick SE	*Farnell E, et al.* (2012)** Expression and secretion of Aspergillus fumigatus proteases are regulated in response to different protein substrates. Fungal Biol 116(9):1003-12
Bowyer P, Mosquera J, Anderson M, Birch M, Bromley M, Denning DW	*Bowyer P, et al.* (2012)** Identification of novel genes conferring altered azole susceptibility in Aspergillus fumigatus. FEMS Microbiol Lett 332(1):10-9
Tuckwell D, Denning DW, Bowyer P	*Tuckwell D, et al.* (2011)** A public resource for metabolic pathway mapping of Aspergillus fumigatus Af293. Med Mycol 49 Suppl 1:S114-9
Howard SJ, Harrison E, Bowyer P, Varga J, Denning DW	*Howard SJ, et al.* (2011)** Cryptic species and azole resistance in the Aspergillus niger complex. Antimicrob Agents Chemother 55(10):4802-9
Fraczek MG, Bromley M, Bowyer P	*Fraczek MG, et al.* (2011)** An improved model of the Aspergillus fumigatus CYP51A protein. Antimicrob Agents Chemother 55(5):2483-6
Denning DW, Park S, Lass-Florl C, Fraczek MG, Kirwan M, Gore R, Smith J, Bueid A, Moore CB, Bowyer P, Perlin DS	*Denning DW, et al.* (2011)** High-frequency triazole resistance found In nonculturable Aspergillus fumigatus from lungs of patients with chronic fungal disease. Clin Infect Dis 52(9):1123-9
Bowyer P, Moore CB, Rautemaa R, Denning DW, Richardson MD	*Bowyer P, et al.* (2011)** Azole antifungal resistance today: focus on Aspergillus. Curr Infect Dis Rep 13(6):485-91
Harrison E, Stalhberger T, Whelan R, Sugrue M, Wingard JR, Alexander BD, Follett SA, Bowyer P, Denning DW	*Harrison E, et al.* (2010)** Aspergillus DNA contamination in blood collection tubes. Diagn Microbiol Infect Dis 67(4):392-4
Fraczek MG, Rashid R, Denson M, Denning DW, Bowyer P	*Fraczek MG, et al.* (2010)** Aspergillus fumigatus allergen expression is coordinately regulated in response to hydrogen peroxide and cyclic AMP. Clin Mol Allergy 8:15
Bueid A, Howard SJ, Moore CB, Richardson MD, Harrison E, Bowyer P, Denning DW	*Bueid A, et al.* (2010)** Azole antifungal resistance in Aspergillus fumigatus: 2008 and 2009. J Antimicrob Chemother 65(10):2116-8
Fedorova ND, Khaldi N, Joardar VS, Maiti R, Amedeo P, Anderson MJ, Crabtree J, Silva JC, Badger JH, Albarraq A, Angiuoli S, Bussey H, Bowyer P, Cotty PJ, Dyer PS, Egan A, Galens K, Fraser-Liggett CM, Haas BJ, Inman JM, Kent R, Lemieux S, Malavazi I, Orvis J, Roemer T, Ronning CM, Sundaram JP, Sutton G, Turner G, Venter JC, White OR, Whitty BR, Youngman P, Wolfe KH, Goldman GH, Wortman JR, Jiang B, Denning DW, Nierman WC	*Fedorova ND, et al.* (2008)** Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. PLoS Genet 4(4):e1000046
Hedayati MT, Pasqualotto AC, Warn PA, Bowyer P, Denning DW	*Hedayati MT, et al.* (2007)** Aspergillus flavus: human pathogen, allergen and mycotoxin producer. Microbiology 153(Pt 6):1677-92
Bowyer P, Denning DW	Bowyer P and Denning DW (2007) Genomic analysis of allergen genes in Aspergillus spp: the relevance of genomics to everyday research. Med Mycol 45(1):17-26
Ronning CM, Fedorova ND, Bowyer P, Coulson R, Goldman G, Kim HS, Turner G, Wortman JR, Yu J, Anderson MJ, Denning DW, Nierman WC	*Ronning CM, et al.* (2005)** Genomics of Aspergillus fumigatus. Rev Iberoam Micol 22(4):223-8
Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, Garcia JL, Garcia MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jimenez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Latge JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Penalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Cordoba S, Rodriguez-Pena JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sanchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW	*Nierman WC, et al.* (2005)** Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438(7071):1151-6
Mueller E, Bailey A, Corran A, Michael AJ, Bowyer P	*Mueller E, et al.* (2001)** Ornithine decarboxylase knockout in Tapesia yallundae abolishes infection plaque formation in vitro but does not reduce virulence toward wheat. Mol Plant Microbe Interact 14(11):1303-11
Bailey A, Mueller E, Bowyer P	*Bailey A, et al.* (2000)** Ornithine decarboxylase of Stagonospora (Septoria) nodorum is required for virulence toward wheat. J Biol Chem 275(19):14242-7
Bowyer P, De Lucas JR, Turner G	*Bowyer P, et al.* (1994)** Regulation of the expression of the isocitrate lyase gene (acuD) of Aspergillus nidulans. Mol Gen Genet 242(4):484-9
Bowyer P, Osbourn AE, Daniels MJ	*Bowyer P, et al.* (1994)** An "instant gene bank" method for heterologous gene cloning: complementation of two Aspergillus nidulans mutants with Gaeumannomyces graminis DNA. Mol Gen Genet 242(4):448-54

Author(s)

Citation

Gsaller F, Hortschansky P, Furukawa T, Carr PD, Rash B, Capilla J, Muller C, Bracher F, Bowyer P, Haas H, Brakhage AA, Bromley MJ

Gsaller F, et al. (2016) Sterol Biosynthesis and Azole Tolerance Is Governed by the Opposing Actions of SrbA and the CCAAT Binding Complex. PLoS Pathog 12(7):e1005775

Bromley M, Johns A, Davies E, Fraczek M, Mabey Gilsenan J, Kurbatova N, Keays M, Kapushesky M, Gut M, Gut I, Denning DW, Bowyer P

Bromley M, et al. (2016) Mitochondrial Complex I Is a Global Regulator of Secondary Metabolism, Virulence and Azole Sensitivity in Fungi. PLoS One 11(7):e0158724

Sakko M, Moore C, Novak-Frazer L, Rautemaa V, Sorsa T, Hietala P, Jarvinen A, Bowyer P, Tjaderhane L, Rautemaa R

Sakko M, et al. (2014) 2-hydroxyisocaproic acid is fungicidal for Candida and Aspergillus species. Mycoses 57(4):214-21

Bromley MJ, van Muijlwijk G, Fraczek MG, Robson G, Verweij PE, Denning DW, Bowyer P

Bromley MJ, et al. (2014) Occurrence of azole-resistant species of Aspergillus in the UK environment. J Glob Antimicrob Resist 2(4):276-279

Bowyer P, Denning DW

Bowyer P and Denning DW (2014) Environmental fungicides and triazole resistance in Aspergillus. Pest Manag Sci 70(2):173-8

Rizzetto L, Giovannini G, Bromley M, Bowyer P, Romani L, Cavalieri D

Rizzetto L, et al. (2013) Strain dependent variation of immune responses to A. fumigatus: definition of pathogenic species. PLoS One 8(2):e56651

Howard SJ, Pasqualotto AC, Anderson MJ, Leatherbarrow H, Albarrag AM, Harrison E, Gregson L, Bowyer P, Denning DW

Howard SJ, et al. (2013) Major variations in Aspergillus fumigatus arising within aspergillomas in chronic pulmonary aspergillosis. Mycoses 56(4):434-41

Fraczek MG, Bromley M, Buied A, Moore CB, Rajendran R, Rautemaa R, Ramage G, Denning DW, Bowyer P

Fraczek MG, et al. (2013) The cdr1B efflux transporter is associated with non-cyp51a-mediated itraconazole resistance in Aspergillus fumigatus. J Antimicrob Chemother 68(7):1486-96

Denning DW, Bowyer P

Denning DW and Bowyer P (2013) Voriconazole resistance in Aspergillus fumigatus: should we be concerned? Clin Infect Dis 57(4):521-3

Buied A, Moore CB, Denning DW, Bowyer P

Buied A, et al. (2013) High-level expression of cyp51B in azole-resistant clinical Aspergillus fumigatus isolates. J Antimicrob Chemother 68(3):512-4

Mabey Gilsenan J, Cooley J, Bowyer P

Mabey Gilsenan J, et al. (2012) CADRE: the Central Aspergillus Data REpository 2012. Nucleic Acids Res 40(Database issue):D660-6

Farnell E, Rousseau K, Thornton DJ, Bowyer P, Herrick SE

Farnell E, et al. (2012) Expression and secretion of Aspergillus fumigatus proteases are regulated in response to different protein substrates. Fungal Biol 116(9):1003-12

Bowyer P, Mosquera J, Anderson M, Birch M, Bromley M, Denning DW

Bowyer P, et al. (2012) Identification of novel genes conferring altered azole susceptibility in Aspergillus fumigatus. FEMS Microbiol Lett 332(1):10-9

Tuckwell D, Denning DW, Bowyer P

Tuckwell D, et al. (2011) A public resource for metabolic pathway mapping of Aspergillus fumigatus Af293. Med Mycol 49 Suppl 1:S114-9

Howard SJ, Harrison E, Bowyer P, Varga J, Denning DW

Howard SJ, et al. (2011) Cryptic species and azole resistance in the Aspergillus niger complex. Antimicrob Agents Chemother 55(10):4802-9

Fraczek MG, Bromley M, Bowyer P

Fraczek MG, et al. (2011) An improved model of the Aspergillus fumigatus CYP51A protein. Antimicrob Agents Chemother 55(5):2483-6

Denning DW, Park S, Lass-Florl C, Fraczek MG, Kirwan M, Gore R, Smith J, Bueid A, Moore CB, Bowyer P, Perlin DS

Denning DW, et al. (2011) High-frequency triazole resistance found In nonculturable Aspergillus fumigatus from lungs of patients with chronic fungal disease. Clin Infect Dis 52(9):1123-9

Bowyer P, Moore CB, Rautemaa R, Denning DW, Richardson MD

Bowyer P, et al. (2011) Azole antifungal resistance today: focus on Aspergillus. Curr Infect Dis Rep 13(6):485-91

Harrison E, Stalhberger T, Whelan R, Sugrue M, Wingard JR, Alexander BD, Follett SA, Bowyer P, Denning DW

Harrison E, et al. (2010) Aspergillus DNA contamination in blood collection tubes. Diagn Microbiol Infect Dis 67(4):392-4

Fraczek MG, Rashid R, Denson M, Denning DW, Bowyer P

Fraczek MG, et al. (2010) Aspergillus fumigatus allergen expression is coordinately regulated in response to hydrogen peroxide and cyclic AMP. Clin Mol Allergy 8:15

Bueid A, Howard SJ, Moore CB, Richardson MD, Harrison E, Bowyer P, Denning DW

Bueid A, et al. (2010) Azole antifungal resistance in Aspergillus fumigatus: 2008 and 2009. J Antimicrob Chemother 65(10):2116-8

Fedorova ND, Khaldi N, Joardar VS, Maiti R, Amedeo P, Anderson MJ, Crabtree J, Silva JC, Badger JH, Albarraq A, Angiuoli S, Bussey H, Bowyer P, Cotty PJ, Dyer PS, Egan A, Galens K, Fraser-Liggett CM, Haas BJ, Inman JM, Kent R, Lemieux S, Malavazi I, Orvis J, Roemer T, Ronning CM, Sundaram JP, Sutton G, Turner G, Venter JC, White OR, Whitty BR, Youngman P, Wolfe KH, Goldman GH, Wortman JR, Jiang B, Denning DW, Nierman WC

Fedorova ND, et al. (2008) Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. PLoS Genet 4(4):e1000046

Hedayati MT, Pasqualotto AC, Warn PA, Bowyer P, Denning DW

Hedayati MT, et al. (2007) Aspergillus flavus: human pathogen, allergen and mycotoxin producer. Microbiology 153(Pt 6):1677-92

Bowyer P, Denning DW

Bowyer P and Denning DW (2007) Genomic analysis of allergen genes in Aspergillus spp: the relevance of genomics to everyday research. Med Mycol 45(1):17-26

Ronning CM, Fedorova ND, Bowyer P, Coulson R, Goldman G, Kim HS, Turner G, Wortman JR, Yu J, Anderson MJ, Denning DW, Nierman WC

Ronning CM, et al. (2005) Genomics of Aspergillus fumigatus. Rev Iberoam Micol 22(4):223-8

Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, Garcia JL, Garcia MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jimenez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Latge JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Penalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Cordoba S, Rodriguez-Pena JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sanchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW

Nierman WC, et al. (2005) Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438(7071):1151-6

Mueller E, Bailey A, Corran A, Michael AJ, Bowyer P

Mueller E, et al. (2001) Ornithine decarboxylase knockout in Tapesia yallundae abolishes infection plaque formation in vitro but does not reduce virulence toward wheat. Mol Plant Microbe Interact 14(11):1303-11

Bailey A, Mueller E, Bowyer P

Bailey A, et al. (2000) Ornithine decarboxylase of Stagonospora (Septoria) nodorum is required for virulence toward wheat. J Biol Chem 275(19):14242-7

Bowyer P, De Lucas JR, Turner G

Bowyer P, et al. (1994) Regulation of the expression of the isocitrate lyase gene (acuD) of Aspergillus nidulans. Mol Gen Genet 242(4):484-9

Bowyer P, Osbourn AE, Daniels MJ

Bowyer P, et al. (1994) An "instant gene bank" method for heterologous gene cloning: complementation of two Aspergillus nidulans mutants with Gaeumannomyces graminis DNA. Mol Gen Genet 242(4):448-54

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To cite AspGD, please use the following reference: Cerqueira GC, Arnaud MB, Inglis DO, Skrzypek MS, Binkley G, Simison M, Miyasato SR, Binkley J, Orvis J, Shah P, Wymore F, Sherlock G, Wortman JR (2014). The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations. Nucleic Acids Res 42 (1); D705-10; see How to cite AspGD.