| Author(s) | Citation |
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| Zhang S, Ban A, Ebara N, Mizutani O, Tanaka M, Shintani T, Gomi K | Zhang S, et al. (2017) Self-excising Cre/mutant lox marker recycling system for multiple gene integrations and consecutive gene deletions in Aspergillus oryzae. J Biosci Bioeng 123(4):403-411
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| Zhang S, Sato H, Ichinose S, Tanaka M, Miyazawa K, Yoshimi A, Abe K, Shintani T, Gomi K | Zhang S, et al. (2017) Cell wall alpha-1,3-glucan prevents alpha-amylase adsorption onto fungal cell in submerged culture of Aspergillus oryzae. J Biosci Bioeng 124(1):47-53
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| Tanaka M, Hiramoto T, Tada H, Shintani T, Gomi K | Tanaka M, et al. (2017) Improved alpha-Amylase Production by Dephosphorylation Mutation of CreD, an Arrestin-Like Protein Required for Glucose-Induced Endocytosis of Maltose Permease and Carbon Catabolite Derepression in Aspergillus oryzae. Appl Environ Microbiol 83(13)
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| Hagiwara D, Miura D, Shimizu K, Paul S, Ohba A, Gonoi T, Watanabe A, Kamei K, Shintani T, Moye-Rowley WS, Kawamoto S, Gomi K | Hagiwara D, et al. (2017) A Novel Zn2-Cys6 Transcription Factor AtrR Plays a Key Role in an Azole Resistance Mechanism of Aspergillus fumigatus by Co-regulating cyp51A and cdr1B Expressions. PLoS Pathog 13(1):e1006096
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| Watanabe A, Suzuki M, Ujiie S, Gomi K | Watanabe A, et al. (2016) Purification and enzymatic characterization of a novel beta-1,6-glucosidase from Aspergillus oryzae. J Biosci Bioeng 121(3):259-64
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| Tanaka M, Yoshimura M, Ogawa M, Koyama Y, Shintani T, Gomi K | Tanaka M, et al. (2016) The C2H2-type transcription factor, FlbC, is involved in the transcriptional regulation of Aspergillus oryzae glucoamylase and protease genes specifically expressed in solid-state culture. Appl Microbiol Biotechnol 100(13):5859-68
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| Mizutani O, Shiina M, Yoshimi A, Sano M, Watanabe T, Yamagata Y, Nakajima T, Gomi K, Abe K | Mizutani O, et al. (2016) Substantial decrease in cell wall alpha-1,3-glucan caused by disruption of the kexB gene encoding a subtilisin-like processing protease in Aspergillus oryzae. Biosci Biotechnol Biochem 80(9):1781-91
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| Tanaka M, Shintani T, Gomi K | Tanaka M, et al. (2015) Unfolded protein response is required for Aspergillus oryzae growth under conditions inducing secretory hydrolytic enzyme production. Fungal Genet Biol 85:1-6
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| Suzuki K, Tanaka M, Konno Y, Ichikawa T, Ichinose S, Hasegawa-Shiro S, Shintani T, Gomi K | Suzuki K, et al. (2015) Distinct mechanism of activation of two transcription factors, AmyR and MalR, involved in amylolytic enzyme production in Aspergillus oryzae. Appl Microbiol Biotechnol 99(4):1805-15
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| Kudo K, Watanabe A, Ujiie S, Shintani T, Gomi K | Kudo K, et al. (2015) Purification and enzymatic characterization of secretory glycoside hydrolase family 3 (GH3) aryl beta-glucosidases screened from Aspergillus oryzae genome. J Biosci Bioeng 120(6):614-23
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| Hiramoto T, Tanaka M, Ichikawa T, Matsuura Y, Hasegawa-Shiro S, Shintani T, Gomi K | Hiramoto T, et al. (2015) Endocytosis of a maltose permease is induced when amylolytic enzyme production is repressed in Aspergillus oryzae. Fungal Genet Biol 82:136-44
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| Ichinose S, Tanaka M, Shintani T, Gomi K | Ichinose S, et al. (2014) Improved alpha-amylase production by Aspergillus oryzae after a double deletion of genes involved in carbon catabolite repression. Appl Microbiol Biotechnol 98(1):335-43
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| Tagami K, Liu C, Minami A, Noike M, Isaka T, Fueki S, Shichijo Y, Toshima H, Gomi K, Dairi T, Oikawa H | Tagami K, et al. (2013) Reconstitution of biosynthetic machinery for indole-diterpene paxilline in Aspergillus oryzae. J Am Chem Soc 135(4):1260-3
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| Hong SB, Lee M, Kim DH, Varga J, Frisvad JC, Perrone G, Gomi K, Yamada O, Machida M, Houbraken J, Samson RA | Hong SB, et al. (2013) Aspergillus luchuensis, an industrially important black Aspergillus in East Asia. PLoS One 8(5):e63769
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| Chiba R, Minami A, Gomi K, Oikawa H | Chiba R, et al. (2013) Identification of ophiobolin F synthase by a genome mining approach: a sesterterpene synthase from Aspergillus clavatus. Org Lett 15(3):594-7
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| Asai T, Yamamoto T, Shirata N, Taniguchi T, Monde K, Fujii I, Gomi K, Oshima Y | Asai T, et al. (2013) Structurally diverse chaetophenol productions induced by chemically mediated epigenetic manipulation of fungal gene expression. Org Lett 15(13):3346-9
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| Tanaka M, Tokuoka M, Shintani T, Gomi K | Tanaka M, et al. (2012) Transcripts of a heterologous gene encoding mite allergen Der f 7 are stabilized by codon optimization in Aspergillus oryzae. Appl Microbiol Biotechnol 96(5):1275-82
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| Mizutani O, Masaki K, Gomi K, Iefuji H | Mizutani O, et al. (2012) Modified Cre-loxP recombination in Aspergillus oryzae by direct introduction of Cre recombinase for marker gene rescue. Appl Environ Microbiol 78(12):4126-33
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| Garrido SM, Kitamoto N, Watanabe A, Shintani T, Gomi K | Garrido SM, et al. (2012) Functional analysis of FarA transcription factor in the regulation of the genes encoding lipolytic enzymes and hydrophobic surface binding protein for the degradation of biodegradable plastics in Aspergillus oryzae. J Biosci Bioeng 113(5):549-55
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| Tokui M, Kubodera T, Gomi K, Yamashita N, Nishimura A | Tokui M, et al. (2011) Construction of a thiamine pyrophosphate high-producing strain of Aspergillus oryzae by overexpression of three genes involved in thiamine biosynthesis. J Biosci Bioeng 111(4):388-90
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| Tanaka M, Sakai Y, Yamada O, Shintani T, Gomi K | Tanaka M, et al. (2011) In silico analysis of 3'-end-processing signals in Aspergillus oryzae using expressed sequence tags and genomic sequencing data. DNA Res 18(3):189-200
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| Sato H, Toyoshima Y, Shintani T, Gomi K | Sato H, et al. (2011) Identification of potential cell wall component that allows Taka-amylase A adsorption in submerged cultures of Aspergillus oryzae. Appl Microbiol Biotechnol 92(5):961-9
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| Murakami K, Tamada T, Abe K, Nara M, Hisata S, Mitsuishi Y, Muramatsu S, Gomi K, Ebina M, Nukiwa T | Murakami K, et al. (2011) Rapid improvement of osseous sarcoidosis after the treatment of pulmonary aspergillosis by itraconazole. Sarcoidosis Vasc Diffuse Lung Dis 28(1):75-8
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| Kaneda J, Sasaki K, Gomi K, Shintani T | Kaneda J, et al. (2011) Heterologous expression of Aspergillus oryzae xylose reductase and xylitol dehydrogenase genes facilitated xylose utilization in the yeast Saccharomyces cerevisiae. Biosci Biotechnol Biochem 75(1):168-70
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| Fujii R, Minami A, Tsukagoshi T, Sato N, Sahara T, Ohgiya S, Gomi K, Oikawa H | Fujii R, et al. (2011) Total biosynthesis of diterpene aphidicolin, a specific inhibitor of DNA polymerase alpha: heterologous expression of four biosynthetic genes in Aspergillus oryzae. Biosci Biotechnol Biochem 75(9):1813-7
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| Hasegawa S, Takizawa M, Suyama H, Shintani T, Gomi K | Hasegawa S, et al. (2010) Characterization and expression analysis of a maltose-utilizing (MAL) cluster in Aspergillus oryzae. Fungal Genet Biol 47(1):1-9
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| Sakamoto K, Iwashita K, Yamada O, Kobayashi K, Mizuno A, Akita O, Mikami S, Shimoi H, Gomi K | Sakamoto K, et al. (2009) Aspergillus oryzae atfA controls conidial germination and stress tolerance. Fungal Genet Biol 46(12):887-97
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| Ogasawara H, Obata H, Hata Y, Takahashi S, Gomi K | Ogasawara H, et al. (2009) Crawler, a novel Tc1/mariner-type transposable element in Aspergillus oryzae transposes under stress conditions. Fungal Genet Biol 46(6-7):441-9
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| Mizutani O, Furukawa K, Ichiyanagi S, Matsuda Y, Tokuoka M, Fujioka T, Yamagata Y, Gomi K, Abe K | Mizutani O, et al. (2009) Alternative processing of proproteins in Aspergilli kexB gene disruptants under hyperosmotic conditions. Biosci Biotechnol Biochem 73(1):40-6
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| Tokuoka M, Tanaka M, Ono K, Takagi S, Shintani T, Gomi K | Tokuoka M, et al. (2008) Codon optimization increases steady-state mRNA levels in Aspergillus oryzae heterologous gene expression. Appl Environ Microbiol 74(21):6538-46
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| Sakamoto K, Arima TH, Iwashita K, Yamada O, Gomi K, Akita O | Sakamoto K, et al. (2008) Aspergillus oryzae atfB encodes a transcription factor required for stress tolerance in conidia. Fungal Genet Biol 45(6):922-32
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| Mizutani O, Kudo Y, Saito A, Matsuura T, Inoue H, Abe K, Gomi K | Mizutani O, et al. (2008) A defect of LigD (human Lig4 homolog) for nonhomologous end joining significantly improves efficiency of gene-targeting in Aspergillus oryzae. Fungal Genet Biol 45(6):878-89
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| Machida M, Yamada O, Gomi K | Machida M, et al. (2008) Genomics of Aspergillus oryzae: learning from the history of Koji mold and exploration of its future. DNA Res 15(4):173-83
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| Kobayashi T, Abe K, Asai K, Gomi K, Juvvadi PR, Kato M, Kitamoto K, Takeuchi M, Machida M | Kobayashi T, et al. (2007) Genomics of Aspergillus oryzae. Biosci Biotechnol Biochem 71(3):646-70
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| Ohtaki S, Maeda H, Takahashi T, Yamagata Y, Hasegawa F, Gomi K, Nakajima T, Abe K | Ohtaki S, et al. (2006) Novel hydrophobic surface binding protein, HsbA, produced by Aspergillus oryzae. Appl Environ Microbiol 72(4):2407-13
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| Abe K, Gomi K, Hasegawa F, Machida M | Abe K, et al. (2006) Impact of Aspergillus oryzae genomics on industrial production of metabolites. Mycopathologia 162(3):143-53
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| Takahashi T, Maeda H, Yoneda S, Ohtaki S, Yamagata Y, Hasegawa F, Gomi K, Nakajima T, Abe K | Takahashi T, et al. (2005) The fungal hydrophobin RolA recruits polyesterase and laterally moves on hydrophobic surfaces. Mol Microbiol 57(6):1780-96
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| Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, Garcia JL, Garcia MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jimenez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Latge JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Penalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Cordoba S, Rodriguez-Pena JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sanchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW | Nierman WC, et al. (2005) Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438(7071):1151-6
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| Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G, Kusumoto K, Arima T, Akita O, Kashiwagi Y, Abe K, Gomi K, Horiuchi H, Kitamoto K, Kobayashi T, Takeuchi M, Denning DW, Galagan JE, Nierman WC, Yu J, Archer DB, Bennett JW, Bhatnagar D, Cleveland TE, Fedorova ND, Gotoh O, Horikawa H, Hosoyama A, Ichinomiya M, Igarashi R, Iwashita K, Juvvadi PR, Kato M, Kato Y, Kin T, Kokubun A, Maeda H, Maeyama N, Maruyama J, Nagasaki H, Nakajima T, Oda K, Okada K, Paulsen I, Sakamoto K, Sawano T, Takahashi M, Takase K, Terabayashi Y, Wortman JR, Yamada O, Yamagata Y, Anazawa H, Hata Y, Koide Y, Komori T, Koyama Y, Minetoki T, Suharnan S, Tanaka A, Isono K, Kuhara S, Ogasawara N, Kikuchi H | Machida M, et al. (2005) Genome sequencing and analysis of Aspergillus oryzae. Nature 438(7071):1157-61
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| Maeda H, Sano M, Maruyama Y, Tanno T, Akao T, Totsuka Y, Endo M, Sakurada R, Yamagata Y, Machida M, Akita O, Hasegawa F, Abe K, Gomi K, Nakajima T, Iguchi Y | Maeda H, et al. (2004) Transcriptional analysis of genes for energy catabolism and hydrolytic enzymes in the filamentous fungus Aspergillus oryzae using cDNA microarrays and expressed sequence tags. Appl Microbiol Biotechnol 65(1):74-83
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| Kubodera T, Watanabe M, Yoshiuchi K, Yamashita N, Nishimura A, Nakai S, Gomi K, Hanamoto H | Kubodera T, et al. (2003) Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5'-UTR. FEBS Lett 555(3):516-20
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| Ito Y, Sasaki T, Kitamoto K, Kumagai C, Takahashi K, Gomi K, Tamura G | Ito Y, et al. (2002) Cloning, nucleotide sequencing, and expression of the beta-galactosidase-encoding gene (lacA) from Aspergillus oryzae. J Gen Appl Microbiol 48(3):135-42
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| Chigira Y, Abe K, Gomi K, Nakajima T | Chigira Y, et al. (2002) chsZ, a gene for a novel class of chitin synthase from Aspergillus oryzae. Curr Genet 41(4):261-7
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| Akao T, Gomi K, Goto K, Okazaki N, Akita O | Akao T, et al. (2002) Subtractive cloning of cDNA from Aspergillus oryzae differentially regulated between solid-state culture and liquid (submerged) culture. Curr Genet 41(4):275-81
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| Toda T, Sano M, Honda M, Rimoldi OJ, Yang Y, Yamamoto M, Takase K, Hirozumi K, Kitamoto K, Minetoki T, Gomi K, Machida M | Toda T, et al. (2001) Deletion analysis of the enolase gene (enoA) promoter from the filamentous fungus Aspegillus oryzae. Curr Genet 40(4):260-7
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| Tani S, Katsuyama Y, Hayashi T, Suzuki H, Kato M, Gomi K, Kobayashi T, Tsukagoshi N | Tani S, et al. (2001) Characterization of the amyR gene encoding a transcriptional activator for the amylase genes in Aspergillus nidulans. Curr Genet 39(1):10-5
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| Honda M, Minetoki T, Gomi K, Machida M | Honda M, et al. (2000) Rapid detection of homologously integrated DNA fragments and accurate quantitation of their copy number in transgenic Aspergillus oryzae by PCR. J Biosci Bioeng 90(5):577-9
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| Gomi K, Akeno T, Minetoki T, Ozeki K, Kumagai C, Okazaki N, Iimura Y | Gomi K, et al. (2000) Molecular cloning and characterization of a transcriptional activator gene, amyR, involved in the amylolytic gene expression in Aspergillus oryzae. Biosci Biotechnol Biochem 64(4):816-27
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| Yamada O, Lee BR, Gomi K, Iimura Y | Yamada O, et al. (1999) Cloning and functional analysis of the Aspergillus oryzae conidiation regulator gene brlA by its disruption and misscheduled expression. J Biosci Bioeng 87(4):424-9
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| Kuroda M, Hashida-Okado T, Yasumoto R, Gomi K, Kato I, Takesako K | Kuroda M, et al. (1999) An aureobasidin A resistance gene isolated from Aspergillus is a homolog of yeast AUR1, a gene responsible for inositol phosphorylceramide (IPC) synthase activity. Mol Gen Genet 261(2):290-6
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| Kanemori Y, Gomi K, Kitamoto K, Kumagai C, Tamura G | Kanemori Y, et al. (1999) Insertion analysis of putative functional elements in the promoter region of the Aspergillus oryzae Taka-amylase A gene (amyB) using a heterologous Aspergillus nidulans amdS-lacZ fusion gene system. Biosci Biotechnol Biochem 63(1):180-3
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| Ichishima E, Taya N, Ikeguchi M, Chiba Y, Nakamura M, Kawabata C, Inoue T, Takahashi K, Minetoki T, Ozeki K, Kumagai C, Gomi K, Yoshida T, Nakajima T | Ichishima E, et al. (1999) Molecular and enzymic properties of recombinant 1, 2-alpha-mannosidase from Aspergillus saitoi overexpressed in Aspergillus oryzae cells. Biochem J 339 ( Pt 3):589-97
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| Minetoki T, Kumagai C, Gomi K, Kitamoto K, Takahashi K | Minetoki T, et al. (1998) Improvement of promoter activity by the introduction of multiple copies of the conserved region III sequence, involved in the efficient expression of Aspergillus oryzae amylase-encoding genes. Appl Microbiol Biotechnol 50(4):459-67
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| Yamada O, Byung Rho L, Gomi K | Yamada O, et al. (1997) Transformation System for Aspergillus oryzae with Double Auxotrophic Mutations, niaD and sC Biosci Biotechnol Biochem 61:1367-1369
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| Minetoki T, Nunokawa Y, Gomi K, Kitamoto K, Kumagai C, Tamura G | Minetoki T, et al. (1996) Deletion analysis of promoter elements of the Aspergillus oryzae agdA gene encoding alpha-glucosidase. Curr Genet 30(5):432-8
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| Machida M, Gonzalez TV, Boon LK, Gomi K, Jigami Y | Machida M, et al. (1996) Molecular cloning of a genomic DNA for enolase from Aspergillus oryzae. Biosci Biotechnol Biochem 60(1):161-3
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| Fujii I, Ono Y, Tada H, Gomi K, Ebizuka Y, Sankawa U | Fujii I, et al. (1996) Cloning of the polyketide synthase gene atX from Aspergillus terreus and its identification as the 6-methylsalicylic acid synthase gene by heterologous expression. Mol Gen Genet 253(1-2):1-10
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| Yasui K, Kitamoto K, Gomi K, Kumagai C, Ohya Y, Tamura G | Yasui K, et al. (1995) Cloning and nucleotide sequence of the calmodulin-encoding gene (cmdA) from Aspergillus oryzae. Biosci Biotechnol Biochem 59(8):1444-9
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| Minetoki T, Gomi K, Kitamoto K, Kumagai C, Tamura G | Minetoki T, et al. (1995) Nucleotide sequence and expression of alpha-glucosidase-encoding gene (agdA) from Aspergillus oryzae. Biosci Biotechnol Biochem 59(8):1516-21
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| Minetoki T, Gomi K, Kitamoto K, Kumagai C, Tamura G | Minetoki T, et al. (1995) Characteristic expression of three amylase-encoding genes, agdA, amyB, and glaA in Aspergillus oryzae transformants containing multiple copies of the agdA gene. Biosci Biotechnol Biochem 59(12):2251-4
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| Huang KX, Fujii I, Ebizuka Y, Gomi K, Sankawa U | Huang KX, et al. (1995) Molecular cloning and heterologous expression of the gene encoding dihydrogeodin oxidase, a multicopper blue enzyme from Aspergillus terreus. J Biol Chem 270(37):21495-502
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| Fujii T, Yamaoka H, Gomi K, Kitamoto K, Kumagai C | Fujii T, et al. (1995) Cloning and nucleotide sequence of the ribonuclease T1 gene (rntA) from Aspergillus oryzae and its expression in Saccharomyces cerevisiae and Aspergillus oryzae. Biosci Biotechnol Biochem 59(10):1869-74
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| Tsuchiya K, Nagashima T, Yamamoto Y, Gomi K, Kitamoto K, Kumagai C, Tamura G | Tsuchiya K, et al. (1994) High level secretion of calf chymosin using a glucoamylase-prochymosin fusion gene in Aspergillus oryzae. Biosci Biotechnol Biochem 58(5):895-9
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| Tsuchiya K, Gomi K, Kitamoto K, Kumagai C, Tamura G | Tsuchiya K, et al. (1993) Secretion of calf chymosin from the filamentous fungus Aspergillus oryzae. Appl Microbiol Biotechnol 40(2-3):327-32
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| Gomi K, Arikawa K, Kamiya N, Kitamoto K, Kumagai C | Gomi K, et al. (1993) Cloning and nucleotide sequence of the acid protease-encoding gene (pepA) from Aspergillus oryzae. Biosci Biotechnol Biochem 57(7):1095-100
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| Tsuchiya K, Tada S, Gomi K, Kitamoto K, Kumagai C, Jigami Y, Tamura G | Tsuchiya K, et al. (1992) High level expression of the synthetic human lysozyme gene in Aspergillus oryzae. Appl Microbiol Biotechnol 38(1):109-14
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| Tsuchiya K, Tada S, Gomi K, Kitamoto K, Kumagai C, Tamura G | Tsuchiya K, et al. (1992) Deletion analysis of the Taka-amylase A gene promoter using a homologous transformation system in Aspergillus oryzae. Biosci Biotechnol Biochem 56(11):1849-53
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| Hata Y, Kitamoto K, Gomi K, Kumagai C, Tamura G | Hata Y, et al. (1992) Functional elements of the promoter region of the Aspergillus oryzae glaA gene encoding glucoamylase. Curr Genet 22(2):85-91
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| Tada S, Gomi K, Kitamoto K, Takahashi K, Tamura G, Hara S | Tada S, et al. (1991) Construction of a fusion gene comprising the Taka-amylase A promoter and the Escherichia coli beta-glucuronidase gene and analysis of its expression in Aspergillus oryzae. Mol Gen Genet 229(2):301-6
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| Ozeki K, Kitamoto K, Gomi K, Kumagai C, Tamura G, Hara S | Ozeki K, et al. (1991) Cloning and nucleotide sequence of the genomic ribonuclease T2 gene (rntB) from Aspergillus oryzae. Curr Genet 19(5):367-73
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| Hata Y, Tsuchiya K, Kitamoto K, Gomi K, Kumagai C, Tamura G, Hara S | Hata Y, et al. (1991) Nucleotide sequence and expression of the glucoamylase-encoding gene (glaA) from Aspergillus oryzae. Gene 108(1):145-50
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| Gomi K, Kitamoto K, Kumagai C | Gomi K, et al. (1991) Cloning and molecular characterization of the acetamidase-encoding gene (amdS) from Aspergillus oryzae. Gene 108(1):91-8
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