AspGD Curated Papers

Author(s)	Citation
Ramsubramaniam N, Harris SD, Marten MR	*Ramsubramaniam N, et al.* (2014)** The phosphoproteome of Aspergillus nidulans reveals functional association with cellular processes involved in morphology and secretion. Proteomics 14(21-22):2454-9
Gremillion SK, Harris SD, Jackson-Hayes L, Kaminskyj SG, Loprete DM, Gauthier AC, Mercer S, Ravita AJ, Hill TW	*Gremillion SK, et al.* (2014)** Mutations in proteins of the Conserved Oligomeric Golgi Complex affect polarity, cell wall structure, and glycosylation in the filamentous fungus Aspergillus nidulans. Fungal Genet Biol 73:69-82
Sun X, Zhu J, Bao L, Hu C, Jin C, Harris SD, Liu H, Li S	*Sun X, et al.* (2013)** PyrG is required for maintaining stable cellular uracil level and normal sporulation pattern under excess uracil stress in Aspergillus nidulans. Sci China Life Sci 56(5):467-75
Si H, Rittenour WR, Xu K, Nicksarlian M, Calvo AM, Harris SD	*Si H, et al.* (2012)** Morphogenetic and developmental functions of the Aspergillus nidulans homologues of the yeast bud site selection proteins Bud4 and Axl2. Mol Microbiol 85(2):252-70
Harris SD	Harris SD (2012) Evolution of modular conidiophore development in the aspergilli. Ann N Y Acad Sci 1273:1-6
Rittenour WR, Chen M, Cahoon EB, Harris SD	*Rittenour WR, et al.* (2011)** Control of glucosylceramide production and morphogenesis by the Bar1 ceramide synthase in Fusarium graminearum. PLoS One 6(4):e19385
Harris SD	Harris SD (2011) Cdc42/Rho GTPases in fungi: variations on a common theme. Mol Microbiol 79(5):1123-7
Adalja AA, Sappington PL, Harris SP, Rimmele T, Kreit JW, Kellum JA, Boujoukos AJ	*Adalja AA, et al.* (2011)** Isolation of Aspergillus in three 2009 H1N1 influenza patients. Influenza Other Respir Viruses 5(4):225-9
Si H, Justa-Schuch D, Seiler S, Harris SD	*Si H, et al.* (2010)** Regulation of septum formation by the Bud3-Rho4 GTPase module in Aspergillus nidulans. Genetics 185(1):165-76
Li S, Calvo AM, Yuen GY, Du L, Harris SD	*Li S, et al.* (2009)** Induction of cell wall thickening by the antifungal compound dihydromaltophilin disrupts fungal growth and is mediated by sphingolipid biosynthesis. J Eukaryot Microbiol 56(2):182-7
Harris SD, Turner G, Meyer V, Espeso EA, Specht T, Takeshita N, Helmstedt K	*Harris SD, et al.* (2009)** Morphology and development in Aspergillus nidulans: a complex puzzle. Fungal Genet Biol 46 Suppl 1:S82-S92
Harris SD	Harris SD (2009) The Spitzenkorper: a signalling hub for the control of fungal development? Mol Microbiol 73(5):733-6
Fedorova ND, Harris S, Chen D, Denning DW, Yu J, Cotty PJ, Nierman WC	*Fedorova ND, et al.* (2009)** Using aCGH to study intraspecific genetic variability in two pathogenic molds, Aspergillus fumigatus and Aspergillus flavus. Med Mycol 47 Suppl 1:S34-41
Semighini CP, Harris SD	Semighini CP and Harris SD (2008) Regulation of apical dominance in Aspergillus nidulans hyphae by reactive oxygen species. Genetics 179(4):1919-32
Rittenour WR, Harris SD	Rittenour WR and Harris SD (2008) Characterization of Fusarium graminearum Mes1 reveals roles in cell-surface organization and virulence. Fungal Genet Biol 45(6):933-46
da Silva Ferreira ME, Heinekamp T, Hartl A, Brakhage AA, Semighini CP, Harris SD, Savoldi M, de Gouvea PF, de Souza Goldman MH, Goldman GH	*da Silva Ferreira ME, et al.* (2007)** Functional characterization of the Aspergillus fumigatus calcineurin. Fungal Genet Biol 44(3):219-30
Virag A, Lee MP, Si H, Harris SD	*Virag A, et al.* (2007)** Regulation of hyphal morphogenesis by cdc42 and rac1 homologues in Aspergillus nidulans. Mol Microbiol 66(6):1579-96
Li S, Bao D, Yuen G, Harris SD, Calvo AM	*Li S, et al.* (2007)** basA regulates cell wall organization and asexual/sexual sporulation ratio in Aspergillus nidulans. Genetics 176(1):243-53
Virag A, Harris SD	Virag A and Harris SD (2006) Functional characterization of Aspergillus nidulans homologues of Saccharomyces cerevisiae Spa2 and Bud6. Eukaryot Cell 5(6):881-95
Semighini CP, Savoldi M, Goldman GH, Harris SD	*Semighini CP, et al.* (2006)** Functional characterization of the putative Aspergillus nidulans poly(ADP-ribose) polymerase homolog PrpA. Genetics 173(1):87-98
Semighini CP, Hornby JM, Dumitru R, Nickerson KW, Harris SD	*Semighini CP, et al.* (2006)** Farnesol-induced apoptosis in Aspergillus nidulans reveals a possible mechanism for antagonistic interactions between fungi. Mol Microbiol 59(3):753-64
Malavazi I, Savoldi M, Di Mauro SM, Menck CF, Harris SD, Goldman MH, Goldman GH	*Malavazi I, et al.* (2006)** Transcriptome analysis of Aspergillus nidulans exposed to camptothecin-induced DNA damage. Eukaryot Cell 5(10):1688-704
Malavazi I, Semighini CP, Kress MR, Harris SD, Goldman GH	*Malavazi I, et al.* (2006)** Regulation of hyphal morphogenesis and the DNA damage response by the Aspergillus nidulans ATM homolog AtmA. Genetics 173(1):99-109
Li S, Du L, Yuen G, Harris SD	*Li S, et al.* (2006)** Distinct ceramide synthases regulate polarized growth in the filamentous fungus Aspergillus nidulans. Mol Biol Cell 17(3):1218-27
Forgue P, Halouska S, Werth M, Xu K, Harris S, Powers R	*Forgue P, et al.* (2006)** NMR metabolic profiling of Aspergillus nidulans to monitor drug and protein activity. J Proteome Res 5(8):1916-23
Harris SD, Read ND, Roberson RW, Shaw B, Seiler S, Plamann M, Momany M	*Harris SD, et al.* (2005)** Polarisome meets spitzenkorper: microscopy, genetics, and genomics converge. Eukaryot Cell 4(2):225-9
Gygax SE, Semighini CP, Goldman GH, Harris SD	*Gygax SE, et al.* (2005)** SepBCTF4 is required for the formation of DNA-damage-induced UvsCRAD51 foci in Aspergillus nidulans. Genetics 169(3):1391-402
Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S, Lee SI, Basturkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Penalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW	*Galagan JE, et al.* (2005)** Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438(7071):1105-15
Fagundes MR, Semighini CP, Malavazi I, Savoldi M, de Lima JF, de Souza Goldman MH, Harris SD, Goldman GH	*Fagundes MR, et al.* (2005)** Aspergillus nidulans uvsBATR and scaANBS1 genes show genetic interactions during recovery from replication stress and DNA damage. Eukaryot Cell 4(7):1239-52
Pearson CL, Xu K, Sharpless KE, Harris SD	*Pearson CL, et al.* (2004)** MesA, a novel fungal protein required for the stabilization of polarity axes in Aspergillus nidulans. Mol Biol Cell 15(8):3658-72
Fagundes MR, Fernandes L, Savoldi M, Harris SD, Goldman MH, Goldman GH	*Fagundes MR, et al.* (2003)** Identification of a topoisomerase I mutant, scsA1, as an extragenic suppressor of a mutation in scaA(NBS1), the apparent homolog of human nibrin in Aspergillus nidulans. Genetics 164(3):935-45
Sharpless KE, Harris SD	Sharpless KE and Harris SD (2002) Functional characterization and localization of the Aspergillus nidulans formin SEPA. Mol Biol Cell 13(2):469-79
Kraus PR, Hofmann AF, Harris SD	*Kraus PR, et al.* (2002)** Characterization of the Aspergillus nidulans 14-3-3 homologue, ArtA. FEMS Microbiol Lett 210(1):61-6
Goldman GH, McGuire SL, Harris SD	*Goldman GH, et al.* (2002)** The DNA damage response in filamentous fungi. Fungal Genet Biol 35(3):183-95
Kraus PR, Harris SD	Kraus PR and Harris SD (2001) The Aspergillus nidulans snt genes are required for the regulation of septum formation and cell cycle checkpoints. Genetics 159(2):557-69
Hofmann AF, Harris SD	Hofmann AF and Harris SD (2001) The Aspergillus nidulans musN gene encodes a RecQ helicase that interacts with the PI-3K-related kinase UVSB. Genetics 159(4):1595-604
Harris SD	Harris SD (2001) Septum formation in Aspergillus nidulans. Curr Opin Microbiol 4(6):736-9
Hofmann AF, Harris SD	Hofmann AF and Harris SD (2000) The Aspergillus nidulans uvsB gene encodes an ATM-related kinase required for multiple facets of the DNA damage response. Genetics 154(4):1577-86
Harris SD, Hofmann AF, Tedford HW, Lee MP	*Harris SD, et al.* (1999)** Identification and characterization of genes required for hyphal morphogenesis in the filamentous fungus Aspergillus nidulans. Genetics 151(3):1015-25
Harris SD	Harris SD (1999) Morphogenesis is coordinated with nuclear division in germinating Aspergillus nidulans conidiospores. Microbiology 145 ( Pt 10):2747-56
Harris SD, Kraus PR	Harris SD and Kraus PR (1998) Regulation of septum formation in Aspergillus nidulans by a DNA damage checkpoint pathway. Genetics 148(3):1055-67
Harris SD, Hamer L, Sharpless KE, Hamer JE	*Harris SD, et al.* (1997)** The Aspergillus nidulans sepA gene encodes an FH1/2 protein involved in cytokinesis and the maintenance of cellular polarity. EMBO J 16(12):3474-83
Harris SD	Harris SD (1997) The duplication cycle in Aspergillus nidulans. Fungal Genet Biol 22(1):1-12
Wolkow TD, Harris SD, Hamer JE	*Wolkow TD, et al.* (1996)** Cytokinesis in Aspergillus nidulans is controlled by cell size, nuclear positioning and mitosis. J Cell Sci 109 ( Pt 8):2179-88
Harris SD, Hamer JE	Harris SD and Hamer JE (1995) sepB: an Aspergillus nidulans gene involved in chromosome segregation and the initiation of cytokinesis. EMBO J 14(21):5244-57
Harris SD, Morrell JL, Hamer JE	*Harris SD, et al.* (1994)** Identification and characterization of Aspergillus nidulans mutants defective in cytokinesis. Genetics 136(2):517-32

Author(s)

Citation

Ramsubramaniam N, Harris SD, Marten MR

Ramsubramaniam N, et al. (2014) The phosphoproteome of Aspergillus nidulans reveals functional association with cellular processes involved in morphology and secretion. Proteomics 14(21-22):2454-9

Gremillion SK, Harris SD, Jackson-Hayes L, Kaminskyj SG, Loprete DM, Gauthier AC, Mercer S, Ravita AJ, Hill TW

Gremillion SK, et al. (2014) Mutations in proteins of the Conserved Oligomeric Golgi Complex affect polarity, cell wall structure, and glycosylation in the filamentous fungus Aspergillus nidulans. Fungal Genet Biol 73:69-82

Sun X, Zhu J, Bao L, Hu C, Jin C, Harris SD, Liu H, Li S

Sun X, et al. (2013) PyrG is required for maintaining stable cellular uracil level and normal sporulation pattern under excess uracil stress in Aspergillus nidulans. Sci China Life Sci 56(5):467-75

Si H, Rittenour WR, Xu K, Nicksarlian M, Calvo AM, Harris SD

Si H, et al. (2012) Morphogenetic and developmental functions of the Aspergillus nidulans homologues of the yeast bud site selection proteins Bud4 and Axl2. Mol Microbiol 85(2):252-70

Harris SD

Harris SD (2012) Evolution of modular conidiophore development in the aspergilli. Ann N Y Acad Sci 1273:1-6

Rittenour WR, Chen M, Cahoon EB, Harris SD

Rittenour WR, et al. (2011) Control of glucosylceramide production and morphogenesis by the Bar1 ceramide synthase in Fusarium graminearum. PLoS One 6(4):e19385

Harris SD

Harris SD (2011) Cdc42/Rho GTPases in fungi: variations on a common theme. Mol Microbiol 79(5):1123-7

Adalja AA, Sappington PL, Harris SP, Rimmele T, Kreit JW, Kellum JA, Boujoukos AJ

Adalja AA, et al. (2011) Isolation of Aspergillus in three 2009 H1N1 influenza patients. Influenza Other Respir Viruses 5(4):225-9

Si H, Justa-Schuch D, Seiler S, Harris SD

Si H, et al. (2010) Regulation of septum formation by the Bud3-Rho4 GTPase module in Aspergillus nidulans. Genetics 185(1):165-76

Li S, Calvo AM, Yuen GY, Du L, Harris SD

Li S, et al. (2009) Induction of cell wall thickening by the antifungal compound dihydromaltophilin disrupts fungal growth and is mediated by sphingolipid biosynthesis. J Eukaryot Microbiol 56(2):182-7

Harris SD, Turner G, Meyer V, Espeso EA, Specht T, Takeshita N, Helmstedt K

Harris SD, et al. (2009) Morphology and development in Aspergillus nidulans: a complex puzzle. Fungal Genet Biol 46 Suppl 1:S82-S92

Harris SD

Harris SD (2009) The Spitzenkorper: a signalling hub for the control of fungal development? Mol Microbiol 73(5):733-6

Fedorova ND, Harris S, Chen D, Denning DW, Yu J, Cotty PJ, Nierman WC

Fedorova ND, et al. (2009) Using aCGH to study intraspecific genetic variability in two pathogenic molds, Aspergillus fumigatus and Aspergillus flavus. Med Mycol 47 Suppl 1:S34-41

Semighini CP, Harris SD

Semighini CP and Harris SD (2008) Regulation of apical dominance in Aspergillus nidulans hyphae by reactive oxygen species. Genetics 179(4):1919-32

Rittenour WR, Harris SD

Rittenour WR and Harris SD (2008) Characterization of Fusarium graminearum Mes1 reveals roles in cell-surface organization and virulence. Fungal Genet Biol 45(6):933-46

da Silva Ferreira ME, Heinekamp T, Hartl A, Brakhage AA, Semighini CP, Harris SD, Savoldi M, de Gouvea PF, de Souza Goldman MH, Goldman GH

da Silva Ferreira ME, et al. (2007) Functional characterization of the Aspergillus fumigatus calcineurin. Fungal Genet Biol 44(3):219-30

Virag A, Lee MP, Si H, Harris SD

Virag A, et al. (2007) Regulation of hyphal morphogenesis by cdc42 and rac1 homologues in Aspergillus nidulans. Mol Microbiol 66(6):1579-96

Li S, Bao D, Yuen G, Harris SD, Calvo AM

Li S, et al. (2007) basA regulates cell wall organization and asexual/sexual sporulation ratio in Aspergillus nidulans. Genetics 176(1):243-53

Virag A, Harris SD

Virag A and Harris SD (2006) Functional characterization of Aspergillus nidulans homologues of Saccharomyces cerevisiae Spa2 and Bud6. Eukaryot Cell 5(6):881-95

Semighini CP, Savoldi M, Goldman GH, Harris SD

Semighini CP, et al. (2006) Functional characterization of the putative Aspergillus nidulans poly(ADP-ribose) polymerase homolog PrpA. Genetics 173(1):87-98

Semighini CP, Hornby JM, Dumitru R, Nickerson KW, Harris SD

Semighini CP, et al. (2006) Farnesol-induced apoptosis in Aspergillus nidulans reveals a possible mechanism for antagonistic interactions between fungi. Mol Microbiol 59(3):753-64

Malavazi I, Savoldi M, Di Mauro SM, Menck CF, Harris SD, Goldman MH, Goldman GH

Malavazi I, et al. (2006) Transcriptome analysis of Aspergillus nidulans exposed to camptothecin-induced DNA damage. Eukaryot Cell 5(10):1688-704

Malavazi I, Semighini CP, Kress MR, Harris SD, Goldman GH

Malavazi I, et al. (2006) Regulation of hyphal morphogenesis and the DNA damage response by the Aspergillus nidulans ATM homolog AtmA. Genetics 173(1):99-109

Li S, Du L, Yuen G, Harris SD

Li S, et al. (2006) Distinct ceramide synthases regulate polarized growth in the filamentous fungus Aspergillus nidulans. Mol Biol Cell 17(3):1218-27

Forgue P, Halouska S, Werth M, Xu K, Harris S, Powers R

Forgue P, et al. (2006) NMR metabolic profiling of Aspergillus nidulans to monitor drug and protein activity. J Proteome Res 5(8):1916-23

Harris SD, Read ND, Roberson RW, Shaw B, Seiler S, Plamann M, Momany M

Harris SD, et al. (2005) Polarisome meets spitzenkorper: microscopy, genetics, and genomics converge. Eukaryot Cell 4(2):225-9

Gygax SE, Semighini CP, Goldman GH, Harris SD

Gygax SE, et al. (2005) SepBCTF4 is required for the formation of DNA-damage-induced UvsCRAD51 foci in Aspergillus nidulans. Genetics 169(3):1391-402

Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S, Lee SI, Basturkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Penalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW

Galagan JE, et al. (2005) Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438(7071):1105-15

Fagundes MR, Semighini CP, Malavazi I, Savoldi M, de Lima JF, de Souza Goldman MH, Harris SD, Goldman GH

Fagundes MR, et al. (2005) Aspergillus nidulans uvsBATR and scaANBS1 genes show genetic interactions during recovery from replication stress and DNA damage. Eukaryot Cell 4(7):1239-52

Pearson CL, Xu K, Sharpless KE, Harris SD

Pearson CL, et al. (2004) MesA, a novel fungal protein required for the stabilization of polarity axes in Aspergillus nidulans. Mol Biol Cell 15(8):3658-72

Fagundes MR, Fernandes L, Savoldi M, Harris SD, Goldman MH, Goldman GH

Fagundes MR, et al. (2003) Identification of a topoisomerase I mutant, scsA1, as an extragenic suppressor of a mutation in scaA(NBS1), the apparent homolog of human nibrin in Aspergillus nidulans. Genetics 164(3):935-45

Sharpless KE, Harris SD

Sharpless KE and Harris SD (2002) Functional characterization and localization of the Aspergillus nidulans formin SEPA. Mol Biol Cell 13(2):469-79

Kraus PR, Hofmann AF, Harris SD

Kraus PR, et al. (2002) Characterization of the Aspergillus nidulans 14-3-3 homologue, ArtA. FEMS Microbiol Lett 210(1):61-6

Goldman GH, McGuire SL, Harris SD

Goldman GH, et al. (2002) The DNA damage response in filamentous fungi. Fungal Genet Biol 35(3):183-95

Kraus PR, Harris SD

Kraus PR and Harris SD (2001) The Aspergillus nidulans snt genes are required for the regulation of septum formation and cell cycle checkpoints. Genetics 159(2):557-69

Hofmann AF, Harris SD

Hofmann AF and Harris SD (2001) The Aspergillus nidulans musN gene encodes a RecQ helicase that interacts with the PI-3K-related kinase UVSB. Genetics 159(4):1595-604

Harris SD

Harris SD (2001) Septum formation in Aspergillus nidulans. Curr Opin Microbiol 4(6):736-9

Hofmann AF, Harris SD

Hofmann AF and Harris SD (2000) The Aspergillus nidulans uvsB gene encodes an ATM-related kinase required for multiple facets of the DNA damage response. Genetics 154(4):1577-86

Harris SD, Hofmann AF, Tedford HW, Lee MP

Harris SD, et al. (1999) Identification and characterization of genes required for hyphal morphogenesis in the filamentous fungus Aspergillus nidulans. Genetics 151(3):1015-25

Harris SD

Harris SD (1999) Morphogenesis is coordinated with nuclear division in germinating Aspergillus nidulans conidiospores. Microbiology 145 ( Pt 10):2747-56

Harris SD, Kraus PR

Harris SD and Kraus PR (1998) Regulation of septum formation in Aspergillus nidulans by a DNA damage checkpoint pathway. Genetics 148(3):1055-67

Harris SD, Hamer L, Sharpless KE, Hamer JE

Harris SD, et al. (1997) The Aspergillus nidulans sepA gene encodes an FH1/2 protein involved in cytokinesis and the maintenance of cellular polarity. EMBO J 16(12):3474-83

Harris SD

Harris SD (1997) The duplication cycle in Aspergillus nidulans. Fungal Genet Biol 22(1):1-12

Wolkow TD, Harris SD, Hamer JE

Wolkow TD, et al. (1996) Cytokinesis in Aspergillus nidulans is controlled by cell size, nuclear positioning and mitosis. J Cell Sci 109 ( Pt 8):2179-88

Harris SD, Hamer JE

Harris SD and Hamer JE (1995) sepB: an Aspergillus nidulans gene involved in chromosome segregation and the initiation of cytokinesis. EMBO J 14(21):5244-57

Harris SD, Morrell JL, Hamer JE

Harris SD, et al. (1994) Identification and characterization of Aspergillus nidulans mutants defective in cytokinesis. Genetics 136(2):517-32

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To cite AspGD, please use the following reference: Cerqueira GC, Arnaud MB, Inglis DO, Skrzypek MS, Binkley G, Simison M, Miyasato SR, Binkley J, Orvis J, Shah P, Wymore F, Sherlock G, Wortman JR (2014). The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations. Nucleic Acids Res 42 (1); D705-10; see How to cite AspGD.