AspGD Curated Papers

Author(s)	Citation
Nakamura H, Katayama T, Okabe T, Iwashita K, Fujii W, Kitamoto K, Maruyama JI	*Nakamura H, et al.* (2017)** Highly efficient gene targeting in Aspergillus oryzae industrial strains under ligD mutation introduced by genome editing: Strain-specific differences in the effects of deleting EcdR, the negative regulator of sclerotia formation. J Gen Appl Microbiol
Oda K, Terado S, Toyoura R, Fukuda H, Kawauchi M, Iwashita K	*Oda K, et al.* (2016)** Development of a promoter shutoff system in Aspergillus oryzae using a sorbitol-sensitive promoter. Biosci Biotechnol Biochem 80(9):1792-801
Kawauchi M, Iwashita K	Kawauchi M and Iwashita K (2014) Functional analysis of histone deacetylase and its role in stress response, drug resistance and solid-state cultivation in Aspergillus oryzae. J Biosci Bioeng 118(2):172-6
Kawauchi M, Nishiura M, Iwashita K	*Kawauchi M, et al.* (2013)** Fungus-specific sirtuin HstD coordinates secondary metabolism and development through control of LaeA. Eukaryot Cell 12(8):1087-96
Toyoshima Y, Takahashi A, Tanaka H, Watanabe J, Mogi Y, Yamazaki T, Hamada R, Iwashita K, Satoh K, Narumi I	*Toyoshima Y, et al.* (2012)** Lethal and mutagenic effects of ion beams and gamma-rays in Aspergillus oryzae. Mutat Res 740(1-2):43-9
Iwashita K	Iwashita K (2012) Unpublished A. oryzae RNA-Seq data from the laboratory of Dr. K. Iwashita
Kiyota T, Hamada R, Sakamoto K, Iwashita K, Yamada O, Mikami S	*Kiyota T, et al.* (2011)** Aflatoxin non-productivity of Aspergillus oryzae caused by loss of function in the aflJ gene product. J Biosci Bioeng 111(5):512-7
Sakamoto K, Iwashita K, Yamada O, Kobayashi K, Mizuno A, Akita O, Mikami S, Shimoi H, Gomi K	*Sakamoto K, et al.* (2009)** Aspergillus oryzae atfA controls conidial germination and stress tolerance. Fungal Genet Biol 46(12):887-97
Sakamoto K, Arima TH, Iwashita K, Yamada O, Gomi K, Akita O	*Sakamoto K, et al.* (2008)** Aspergillus oryzae atfB encodes a transcription factor required for stress tolerance in conidia. Fungal Genet Biol 45(6):922-32
Oda K, Kakizono D, Yamada O, Iefuji H, Akita O, Iwashita K	*Oda K, et al.* (2006)** Proteomic analysis of extracellular proteins from Aspergillus oryzae grown under submerged and solid-state culture conditions. Appl Environ Microbiol 72(5):3448-57
Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G, Kusumoto K, Arima T, Akita O, Kashiwagi Y, Abe K, Gomi K, Horiuchi H, Kitamoto K, Kobayashi T, Takeuchi M, Denning DW, Galagan JE, Nierman WC, Yu J, Archer DB, Bennett JW, Bhatnagar D, Cleveland TE, Fedorova ND, Gotoh O, Horikawa H, Hosoyama A, Ichinomiya M, Igarashi R, Iwashita K, Juvvadi PR, Kato M, Kato Y, Kin T, Kokubun A, Maeda H, Maeyama N, Maruyama J, Nagasaki H, Nakajima T, Oda K, Okada K, Paulsen I, Sakamoto K, Sawano T, Takahashi M, Takase K, Terabayashi Y, Wortman JR, Yamada O, Yamagata Y, Anazawa H, Hata Y, Koide Y, Komori T, Koyama Y, Minetoki T, Suharnan S, Tanaka A, Isono K, Kuhara S, Ogasawara N, Kikuchi H	*Machida M, et al.* (2005)** Genome sequencing and analysis of Aspergillus oryzae. Nature 438(7071):1157-61
Iwashita K	Iwashita K (2002) Recent studies of protein secretion by filamentous fungi. J Biosci Bioeng 94(6):530-5

Author(s)

Citation

Nakamura H, Katayama T, Okabe T, Iwashita K, Fujii W, Kitamoto K, Maruyama JI

Nakamura H, et al. (2017) Highly efficient gene targeting in Aspergillus oryzae industrial strains under ligD mutation introduced by genome editing: Strain-specific differences in the effects of deleting EcdR, the negative regulator of sclerotia formation. J Gen Appl Microbiol

Oda K, Terado S, Toyoura R, Fukuda H, Kawauchi M, Iwashita K

Oda K, et al. (2016) Development of a promoter shutoff system in Aspergillus oryzae using a sorbitol-sensitive promoter. Biosci Biotechnol Biochem 80(9):1792-801

Kawauchi M, Iwashita K

Kawauchi M and Iwashita K (2014) Functional analysis of histone deacetylase and its role in stress response, drug resistance and solid-state cultivation in Aspergillus oryzae. J Biosci Bioeng 118(2):172-6

Kawauchi M, Nishiura M, Iwashita K

Kawauchi M, et al. (2013) Fungus-specific sirtuin HstD coordinates secondary metabolism and development through control of LaeA. Eukaryot Cell 12(8):1087-96

Toyoshima Y, Takahashi A, Tanaka H, Watanabe J, Mogi Y, Yamazaki T, Hamada R, Iwashita K, Satoh K, Narumi I

Toyoshima Y, et al. (2012) Lethal and mutagenic effects of ion beams and gamma-rays in Aspergillus oryzae. Mutat Res 740(1-2):43-9

Iwashita K

Iwashita K (2012) Unpublished A. oryzae RNA-Seq data from the laboratory of Dr. K. Iwashita

Kiyota T, Hamada R, Sakamoto K, Iwashita K, Yamada O, Mikami S

Kiyota T, et al. (2011) Aflatoxin non-productivity of Aspergillus oryzae caused by loss of function in the aflJ gene product. J Biosci Bioeng 111(5):512-7

Sakamoto K, Iwashita K, Yamada O, Kobayashi K, Mizuno A, Akita O, Mikami S, Shimoi H, Gomi K

Sakamoto K, et al. (2009) Aspergillus oryzae atfA controls conidial germination and stress tolerance. Fungal Genet Biol 46(12):887-97

Sakamoto K, Arima TH, Iwashita K, Yamada O, Gomi K, Akita O

Sakamoto K, et al. (2008) Aspergillus oryzae atfB encodes a transcription factor required for stress tolerance in conidia. Fungal Genet Biol 45(6):922-32

Oda K, Kakizono D, Yamada O, Iefuji H, Akita O, Iwashita K

Oda K, et al. (2006) Proteomic analysis of extracellular proteins from Aspergillus oryzae grown under submerged and solid-state culture conditions. Appl Environ Microbiol 72(5):3448-57

Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G, Kusumoto K, Arima T, Akita O, Kashiwagi Y, Abe K, Gomi K, Horiuchi H, Kitamoto K, Kobayashi T, Takeuchi M, Denning DW, Galagan JE, Nierman WC, Yu J, Archer DB, Bennett JW, Bhatnagar D, Cleveland TE, Fedorova ND, Gotoh O, Horikawa H, Hosoyama A, Ichinomiya M, Igarashi R, Iwashita K, Juvvadi PR, Kato M, Kato Y, Kin T, Kokubun A, Maeda H, Maeyama N, Maruyama J, Nagasaki H, Nakajima T, Oda K, Okada K, Paulsen I, Sakamoto K, Sawano T, Takahashi M, Takase K, Terabayashi Y, Wortman JR, Yamada O, Yamagata Y, Anazawa H, Hata Y, Koide Y, Komori T, Koyama Y, Minetoki T, Suharnan S, Tanaka A, Isono K, Kuhara S, Ogasawara N, Kikuchi H

Machida M, et al. (2005) Genome sequencing and analysis of Aspergillus oryzae. Nature 438(7071):1157-61

Iwashita K

Iwashita K (2002) Recent studies of protein secretion by filamentous fungi. J Biosci Bioeng 94(6):530-5

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To cite AspGD, please use the following reference: Cerqueira GC, Arnaud MB, Inglis DO, Skrzypek MS, Binkley G, Simison M, Miyasato SR, Binkley J, Orvis J, Shah P, Wymore F, Sherlock G, Wortman JR (2014). The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations. Nucleic Acids Res 42 (1); D705-10; see How to cite AspGD.