| Author(s) | Citation |
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| Kunitake E, Kobayashi T | Kunitake E and Kobayashi T (2017) Conservation and diversity of the regulators of cellulolytic enzyme genes in Ascomycete fungi. Curr Genet
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| Kobayashi T, Maeda H, Takeuchi M, Yamagata Y | Kobayashi T, et al. (2017) Deletion of admB gene encoding a fungal ADAM affects cell wall construction in Aspergillus oryzae. Biosci Biotechnol Biochem 81(5):1041-1050
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| Kunitake E, Hagiwara D, Miyamoto K, Kanamaru K, Kimura M, Kobayashi T | Kunitake E, et al. (2016) Regulation of genes encoding cellulolytic enzymes by Pal-PacC signaling in Aspergillus nidulans. Appl Microbiol Biotechnol 100(8):3621-35
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| Kojima T, Kunitake E, Ihara K, Kobayashi T, Nakano H | Kojima T, et al. (2016) A Robust Analytical Pipeline for Genome-Wide Identification of the Genes Regulated by a Transcription Factor: Combinatorial Analysis Performed Using gSELEX-Seq and RNA-Seq. PLoS One 11(7):e0159011
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| Hortschansky P, Ando E, Tuppatsch K, Arikawa H, Kobayashi T, Kato M, Haas H, Brakhage AA | Hortschansky P, et al. (2015) Deciphering the combinatorial DNA-binding code of the CCAAT-binding complex and the iron-regulatory basic region leucine zipper (bZIP) transcription factor HapX. J Biol Chem 290(10):6058-70
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| Hayashi S, Yoshioka M, Matsui T, Kojima K, Kato M, Kanamaru K, Kobayashi T | Hayashi S, et al. (2014) Control of reactive oxygen species (ROS) production through histidine kinases in Aspergillus nidulans under different growth conditions. FEBS Open Bio 4:90-5
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| Yamakawa Y, Endo Y, Li N, Yoshizawa M, Aoyama M, Watanabe A, Kanamaru K, Kato M, Kobayashi T | Yamakawa Y, et al. (2013) Regulation of cellulolytic genes by McmA, the SRF-MADS box protein in Aspergillus nidulans. Biochem Biophys Res Commun 431(4):777-82
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| Ogawa M, Kobayashi T, Koyama Y | Ogawa M, et al. (2013) ManR, a transcriptional regulator of the beta-mannan utilization system, controls the cellulose utilization system in Aspergillus oryzae. Biosci Biotechnol Biochem 77(2):426-9
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| Wang P, Kojima T, Kobayashi T, Nakano H | Wang P, et al. (2012) Comprehensive analysis of the DNA-binding specificity of an Aspergillus nidulans transcription factor, AmyR, using a bead display system. Biosci Biotechnol Biochem 76(6):1128-34
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| Ogawa M, Kobayashi T, Koyama Y | Ogawa M, et al. (2012) ManR, a novel Zn(II)2Cys6 transcriptional activator, controls the beta-mannan utilization system in Aspergillus oryzae. Fungal Genet Biol 49(12):987-95
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| Murakoshi Y, Makita T, Kato M, Kobayashi T | Murakoshi Y, et al. (2012) Comparison and characterization of alpha-amylase inducers in Aspergillus nidulans based on nuclear localization of AmyR. Appl Microbiol Biotechnol 94(6):1629-35
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| Noguchi Y, Tanaka H, Kanamaru K, Kato M, Kobayashi T | Noguchi Y, et al. (2011) Xylose triggers reversible phosphorylation of XlnR, the fungal transcriptional activator of xylanolytic and cellulolytic genes in Aspergillus oryzae. Biosci Biotechnol Biochem 75(5):953-9
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| Hanadate T, Wakasugi M, Sogabe K, Kobayashi T, Horita H, Kawamura I, Hori Y, Matsui K, Hoshino Y, Sou M | Hanadate T, et al. (2011) Evaluation of the safety and efficacy of micafungin in Japanese patients with deep mycosis: a post-marketing survey report. J Infect Chemother 17(5):622-32
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| Kojima T, Hashimoto Y, Kato M, Kobayashi T, Nakano H | Kojima T, et al. (2010) High-throughput screening of DNA binding sites for transcription factor AmyR from Aspergillus nidulans using DNA beads display system. J Biosci Bioeng 109(6):519-25
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| Noguchi Y, Sano M, Kanamaru K, Ko T, Takeuchi M, Kato M, Kobayashi T | Noguchi Y, et al. (2009) Genes regulated by AoXlnR, the xylanolytic and cellulolytic transcriptional regulator, in Aspergillus oryzae. Appl Microbiol Biotechnol 85(1):141-54
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| Makita T, Katsuyama Y, Tani S, Suzuki H, Kato N, Todd RB, Hynes MJ, Tsukagoshi N, Kato M, Kobayashi T | Makita T, et al. (2009) Inducer-dependent nuclear localization of a Zn(II)(2)Cys(6) transcriptional activator, AmyR, in Aspergillus nidulans. Biosci Biotechnol Biochem 73(2):391-9
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| Suzuki A, Kanamaru K, Azuma N, Kato M, Kobayashi T | Suzuki A, et al. (2008) GFP-tagged expression analysis revealed that some histidine kinases of Aspergillus nidulans show temporally and spatially different expression during the life cycle. Biosci Biotechnol Biochem 72(2):428-34
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| Endo Y, Yokoyama M, Morimoto M, Shirai K, Chikamatsu G, Kato N, Tsukagoshi N, Kato M, Kobayashi T | Endo Y, et al. (2008) Novel promoter sequence required for inductive expression of the Aspergillus nidulans endoglucanase gene eglA. Biosci Biotechnol Biochem 72(2):312-20
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| Kobayashi T, Abe K, Asai K, Gomi K, Juvvadi PR, Kato M, Kitamoto K, Takeuchi M, Machida M | Kobayashi T, et al. (2007) Genomics of Aspergillus oryzae. Biosci Biotechnol Biochem 71(3):646-70
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| Hagiwara D, Asano Y, Marui J, Furukawa K, Kanamaru K, Kato M, Abe K, Kobayashi T, Yamashino T, Mizuno T | Hagiwara D, et al. (2007) The SskA and SrrA response regulators are implicated in oxidative stress responses of hyphae and asexual spores in the phosphorelay signaling network of Aspergillus nidulans. Biosci Biotechnol Biochem 71(4):1003-14
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| Hagiwara D, Matsubayashi Y, Marui J, Furukawa K, Yamashino T, Kanamaru K, Kato M, Abe K, Kobayashi T, Mizuno T | Hagiwara D, et al. (2007) Characterization of the NikA histidine kinase implicated in the phosphorelay signal transduction of Aspergillus nidulans, with special reference to fungicide responses. Biosci Biotechnol Biochem 71(3):844-7
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| Furukawa K, Yoshimi A, Furukawa T, Hoshi Y, Hagiwara D, Sato N, Fujioka T, Mizutani O, Mizuno T, Kobayashi T, Abe K | Furukawa K, et al. (2007) Novel reporter gene expression systems for monitoring activation of the Aspergillus nidulans HOG pathway. Biosci Biotechnol Biochem 71(7):1724-30
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| Azuma N, Kanamaru K, Matsushika A, Yamashino T, Mizuno T, Kato M, Kobayashi T | Azuma N, et al. (2007) In vitro analysis of His-Asp phosphorelays in Aspergillus nidulans: the first direct biochemical evidence for the existence of His-Asp phosphotransfer systems in filamentous fungi. Biosci Biotechnol Biochem 71(10):2493-502
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| Tanoue S, Kamei K, Goda H, Tanaka A, Kobayashi T, Tsukagoshi N, Kato M | Tanoue S, et al. (2006) The region in a subunit of the Aspergillus CCAAT-binding protein similar to the HAP4p-recruiting domain of Saccharomyces cerevisiae Hap5p is not essential for transcriptional enhancement. Biosci Biotechnol Biochem 70(4):782-7
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| Nakamura T, Maeda Y, Tanoue N, Makita T, Kato M, Kobayashi T | Nakamura T, et al. (2006) Expression profile of amylolytic genes in Aspergillus nidulans. Biosci Biotechnol Biochem 70(10):2363-70
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| Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, Garcia JL, Garcia MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jimenez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Latge JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Penalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Cordoba S, Rodriguez-Pena JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sanchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW | Nierman WC, et al. (2005) Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438(7071):1151-6
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| Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G, Kusumoto K, Arima T, Akita O, Kashiwagi Y, Abe K, Gomi K, Horiuchi H, Kitamoto K, Kobayashi T, Takeuchi M, Denning DW, Galagan JE, Nierman WC, Yu J, Archer DB, Bennett JW, Bhatnagar D, Cleveland TE, Fedorova ND, Gotoh O, Horikawa H, Hosoyama A, Ichinomiya M, Igarashi R, Iwashita K, Juvvadi PR, Kato M, Kato Y, Kin T, Kokubun A, Maeda H, Maeyama N, Maruyama J, Nagasaki H, Nakajima T, Oda K, Okada K, Paulsen I, Sakamoto K, Sawano T, Takahashi M, Takase K, Terabayashi Y, Wortman JR, Yamada O, Yamagata Y, Anazawa H, Hata Y, Koide Y, Komori T, Koyama Y, Minetoki T, Suharnan S, Tanaka A, Isono K, Kuhara S, Ogasawara N, Kikuchi H | Machida M, et al. (2005) Genome sequencing and analysis of Aspergillus oryzae. Nature 438(7071):1157-61
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| Goda H, Nagase T, Tanoue S, Sugiyama J, Steidl S, Tuncher A, Kobayashi T, Tsukagoshi N, Brakhage AA, Kato M | Goda H, et al. (2005) Nuclear translocation of the heterotrimeric CCAAT binding factor of Aspergillus oryzae is dependent on two redundant localising signals in a single subunit. Arch Microbiol 184(2):93-100
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| Tsunawaki S, Yoshida LS, Nishida S, Kobayashi T, Shimoyama T | Tsunawaki S, et al. (2004) Fungal metabolite gliotoxin inhibits assembly of the human respiratory burst NADPH oxidase. Infect Immun 72(6):3373-82
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| Steidl S, Tuncher A, Goda H, Guder C, Papadopoulou N, Kobayashi T, Tsukagoshi N, Kato M, Brakhage AA | Steidl S, et al. (2004) A single subunit of a heterotrimeric CCAAT-binding complex carries a nuclear localization signal: piggy back transport of the pre-assembled complex to the nucleus. J Mol Biol 342(2):515-24
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| Ito T, Tani S, Itoh T, Tsukagoshi N, Kato M, Kobayashi T | Ito T, et al. (2004) Mode of AmyR binding to the CGGN8AGG sequence in the Aspergillus oryzae taaG2 promoter. Biosci Biotechnol Biochem 68(9):1906-11
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| Rao U, Kato M, Kobayashi T, Tsukagoshi N | Rao U, et al. (2003) Characterization of AnRP-mediated negative regulation of the xylanase gene, cgxA, from Chaetomium gracile in Aspergillus nidulans. Lett Appl Microbiol 36(1):59-63
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| Marui J, Kato M, Kobayashi T, Tsukagoshi N | Marui J, et al. (2003) Upregulation of promoter activity of the Aspergillus oryzae xylanase gene by site-directed mutagenesis. Biotechnol Lett 25(4):371-4
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| Tanaka A, Kato M, Nagase T, Kobayashi T, Tsukagoshi N | Tanaka A, et al. (2002) Isolation of genes encoding novel transcription factors which interact with the Hap complex from Aspergillus species. Biochim Biophys Acta 1576(1-2):176-82
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| Sasangka P, Matsuno A, Tanaka A, Akasaka Y, Suyama S, Kano S, Miyazaki M, Akao T, Kato M, Kobayashi T, Tsukagoshi N | Sasangka P, et al. (2002) Structural features of the glycogen branching enzyme encoding genes from aspergilli. Microbiol Res 157(4):337-44
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| Marui J, Kitamoto N, Kato M, Kobayashi T, Tsukagoshi N | Marui J, et al. (2002) Transcriptional activator, AoXlnR, mediates cellulose-inductive expression of the xylanolytic and cellulolytic genes in Aspergillus oryzae. FEBS Lett 528(1-3):279-82
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| Marui J, Tanaka A, Mimura S, de Graaff LH, Visser J, Kitamoto N, Kato M, Kobayashi T, Tsukagoshi N | Marui J, et al. (2002) A transcriptional activator, AoXlnR, controls the expression of genes encoding xylanolytic enzymes in Aspergillus oryzae. Fungal Genet Biol 35(2):157-69
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| Kato N, Suyama S, Shirokane M, Kato M, Kobayashi T, Tsukagoshi N | Kato N, et al. (2002) Novel alpha-glucosidase from Aspergillus nidulans with strong transglycosylation activity. Appl Environ Microbiol 68(3):1250-6
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| Kato N, Murakoshi Y, Kato M, Kobayashi T, Tsukagoshi N | Kato N, et al. (2002) Isomaltose formed by alpha-glucosidases triggers amylase induction in Aspergillus nidulans. Curr Genet 42(1):43-50
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| Kato M, Tateyama Y, Hayashi K, Naruse F, Oonishi R, Tanoue S, Tanaka A, Kobayashi T, Tsukagoshi N | Kato M, et al. (2002) A quantity control mechanism regulating levels of the HapE subunit of the Hap complex in Aspergillus nidulans: no accumulation of HapE in hapC deletion mutants. FEBS Lett 512(1-3):227-9
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| Tsukagoshi N, Kobayashi T, Kato M | Tsukagoshi N, et al. (2001) Regulation of the amylolytic and (hemi-)cellulolytic genes in aspergilli. J Gen Appl Microbiol 47(1):1-19
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| Tani S, Itoh T, Kato M, Kobayashi T, Tsukagoshi N | Tani S, et al. (2001) In vivo and in vitro analyses of the AmyR binding site of the Aspergillus nidulans agdA promoter; requirement of the CGG direct repeat for induction and high affinity binding of AmyR. Biosci Biotechnol Biochem 65(7):1568-74
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| Tani S, Katsuyama Y, Hayashi T, Suzuki H, Kato M, Gomi K, Kobayashi T, Tsukagoshi N | Tani S, et al. (2001) Characterization of the amyR gene encoding a transcriptional activator for the amylase genes in Aspergillus nidulans. Curr Genet 39(1):10-5
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| Tanaka A, Kamei K, Tanoue S, Papagiannopoulos P, Steidl S, Brakhage AA, Davis MA, Hynes MJ, Kato M, Kobayashi T, Tsukagoshi N | Tanaka A, et al. (2001) AoHapB, AoHapC and AoHapE, subunits of the Aspergillus oryzae CCAAT-binding complex, are functionally interchangeable with the corresponding subunits in Aspergillus nidulans. Curr Genet 39(3):175-82
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| Kato M, Naruse F, Kobayashi T, Tsukagoshi N | Kato M, et al. (2001) No factors except for the hap complex increase the Taka-amylase A gene expression by binding to the CCAAT sequence in the promoter region. Biosci Biotechnol Biochem 65(10):2340-2
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| Tani S, Kawaguchi T, Kato M, Kobayashi T, Tsukagoshi N | Tani S, et al. (2000) A novel nuclear factor, SREB, binds to a cis-acting element, SRE, required for inducible expression of the Aspergillus oryzae Taka-amylase A gene in A. nidulans. Mol Gen Genet 263(2):232-8
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| Tanaka A, Kato M, Hashimoto H, Kamei K, Naruse F, Papagiannopoulos P, Davis MA, Hynes MJ, Kobayashi T, Tsukagoshi N | Tanaka A, et al. (2000) An Aspergillus oryzae CCAAT-binding protein, AoCP, is involved in the high-level expression of the Taka-amylase A gene. Curr Genet 37(6):380-7
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| Kato M, Hayashi K, Kobayashi T, Tsukagoshi N | Kato M, et al. (2000) A simple and rapid method for the preparation of a cell-free extract with CCAAT-binding activity from filamentous fungi. Biosci Biotechnol Biochem 64(2):455-7
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| Chikamatsu G, Shirai K, Kato M, Kobayashi T, Tsukagoshi N | Chikamatsu G, et al. (1999) Structure and expression properties of the endo-beta-1,4-glucanase A gene from the filamentous fungus Aspergillus nidulans. FEMS Microbiol Lett 175(2):239-45
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| Kato M, Aoyama A, Naruse F, Tateyama Y, Hayashi K, Miyazaki M, Papagiannopoulos P, Davis MA, Hynes MJ, Kobayashi T, Tsukagoshi N | Kato M, et al. (1998) The Aspergillus nidulans CCAAT-binding factor AnCP/AnCF is a heteromeric protein analogous to the HAP complex of Saccharomyces cerevisiae. Mol Gen Genet 257(4):404-11
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| Kato M, Aoyama A, Naruse F, Kobayashi T, Tsukagoshi N | Kato M, et al. (1997) An Aspergillus nidulans nuclear protein, AnCP, involved in enhancement of Taka-amylase A gene expression, binds to the CCAAT-containing taaG2, amdS, and gatA promoters. Mol Gen Genet 254(2):119-26
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