| Author(s) | Citation |
|---|
| Tamano K, Miura A, Koike H, Kamisaka Y, Umemura M, Machida M | Tamano K, et al. (2017) High-efficiency extracellular release of free fatty acids from Aspergillus oryzae using non-ionic surfactants. J Biotechnol 248:9-14
  |
| Yoshimi A, Umemura M, Nagano N, Koike H, Machida M, Abe K | Yoshimi A, et al. (2016) Expression of ustR and the Golgi protease KexB are required for ustiloxin B biosynthesis in Aspergillus oryzae. AMB Express 6(1):9
  |
| Tamano K, Bruno KS, Koike H, Ishii T, Miura A, Umemura M, Culley DE, Baker SE, Machida M | Tamano K, et al. (2015) Increased production of free fatty acids in Aspergillus oryzae by disruption of a predicted acyl-CoA synthetase gene. Appl Microbiol Biotechnol 99(7):3103-13
|
| Umemura M, Koyama Y, Takeda I, Hagiwara H, Ikegami T, Koike H, Machida M | Umemura M, et al. (2013) Fine de novo sequencing of a fungal genome using only SOLiD short read data: verification on Aspergillus oryzae RIB40. PLoS One 8(5):e63673
|
| Tamano K, Bruno KS, Karagiosis SA, Culley DE, Deng S, Collett JR, Umemura M, Koike H, Baker SE, Machida M | Tamano K, et al. (2013) Increased production of fatty acids and triglycerides in Aspergillus oryzae by enhancing expressions of fatty acid synthesis-related genes. Appl Microbiol Biotechnol 97(1):269-81
|
| Hong SB, Lee M, Kim DH, Varga J, Frisvad JC, Perrone G, Gomi K, Yamada O, Machida M, Houbraken J, Samson RA | Hong SB, et al. (2013) Aspergillus luchuensis, an industrially important black Aspergillus in East Asia. PLoS One 8(5):e63769
|
| Hisada H, Sano M, Ishida H, Hata Y, Machida M | Hisada H, et al. (2013) Identification of regulatory elements in the glucoamylase-encoding gene (glaB) promoter from Aspergillus oryzae. Appl Microbiol Biotechnol 97(11):4951-6
|
| Umemura M, Koike H, Yamane N, Koyama Y, Satou Y, Kikuzato I, Teruya M, Tsukahara M, Imada Y, Wachi Y, Miwa Y, Yano S, Tamano K, Kawarabayasi Y, Fujimori KE, Machida M, Hirano T | Umemura M, et al. (2012) Comparative genome analysis between Aspergillus oryzae strains reveals close relationship between sites of mutation localization and regions of highly divergent genes among Aspergillus species. DNA Res 19(5):375-82
|
| Marui J, Yamane N, Ohashi-Kunihiro S, Ando T, Terabayashi Y, Sano M, Ohashi S, Ohshima E, Tachibana K, Higa Y, Nishimura M, Koike H, Machida M | Marui J, et al. (2011) Kojic acid biosynthesis in Aspergillus oryzae is regulated by a Zn(II)(2)Cys(6) transcriptional activator and induced by kojic acid at the transcriptional level. J Biosci Bioeng 112(1):40-3
|
| Terabayashi Y, Sano M, Yamane N, Marui J, Tamano K, Sagara J, Dohmoto M, Oda K, Ohshima E, Tachibana K, Higa Y, Ohashi S, Koike H, Machida M | Terabayashi Y, et al. (2010) Identification and characterization of genes responsible for biosynthesis of kojic acid, an industrially important compound from Aspergillus oryzae. Fungal Genet Biol 47(12):953-61
|
| Marui J, Yoshimi A, Hagiwara D, Fujii-Watanabe Y, Oda K, Koike H, Tamano K, Ishii T, Sano M, Machida M, Abe K | Marui J, et al. (2010) Use of the Aspergillus oryzae actin gene promoter in a novel reporter system for exploring antifungal compounds and their target genes. Appl Microbiol Biotechnol 87(5):1829-40
|
| Marui J, Ohashi-Kunihiro S, Ando T, Nishimura M, Koike H, Machida M | Marui J, et al. (2010) Penicillin biosynthesis in Aspergillus oryzae and its overproduction by genetic engineering. J Biosci Bioeng 110(1):8-11
|
| Jin FJ, Takahashi T, Machida M, Koyama Y | Jin FJ, et al. (2009) Identification of a basic helix-loop-helix-type transcription regulator gene in Aspergillus oryzae by systematically deleting large chromosomal segments. Appl Environ Microbiol 75(18):5943-51
|
| Tamano K, Sano M, Yamane N, Terabayashi Y, Toda T, Sunagawa M, Koike H, Hatamoto O, Umitsuki G, Takahashi T, Koyama Y, Asai R, Abe K, Machida M | Tamano K, et al. (2008) Transcriptional regulation of genes on the non-syntenic blocks of Aspergillus oryzae and its functional relationship to solid-state cultivation. Fungal Genet Biol 45(2):139-51
|
| Takahashi T, Jin FJ, Sunagawa M, Machida M, Koyama Y | Takahashi T, et al. (2008) Generation of large chromosomal deletions in koji molds Aspergillus oryzae and Aspergillus sojae via a loop-out recombination. Appl Environ Microbiol 74(24):7684-93
|
| Machida M, Terabayashi Y, Sano M, Yamane N, Tamano K, Payne GA, Yu J, Cleveland TE, Nierman WC | Machida M, et al. (2008) Genomics of industrial Aspergilli and comparison with toxigenic relatives. Food Addit Contam Part A Chem Anal Control Expo Risk Assess 25(9):1147-51
|
| Machida M, Yamada O, Gomi K | Machida M, et al. (2008) Genomics of Aspergillus oryzae: learning from the history of Koji mold and exploration of its future. DNA Res 15(4):173-83
|
| Hisada H, Sano M, Hata Y, Abe Y, Machida M | Hisada H, et al. (2008) Deletion analysis of the catalase-encoding gene (catB) promoter from Aspergillus oryzae. Biosci Biotechnol Biochem 72(1):48-53
|
| Tamano K, Satoh Y, Ishii T, Terabayashi Y, Ohtaki S, Sano M, Takahashi T, Koyama Y, Mizutani O, Abe K, Machida M | Tamano K, et al. (2007) The beta-1,3-exoglucanase gene exgA (exg1) of Aspergillus oryzae is required to catabolize extracellular glucan, and is induced in growth on a solid surface. Biosci Biotechnol Biochem 71(4):926-34
|
| Rokas A, Payne G, Fedorova ND, Baker SE, Machida M, Yu J, Georgianna DR, Dean RA, Bhatnagar D, Cleveland TE, Wortman JR, Maiti R, Joardar V, Amedeo P, Denning DW, Nierman WC | Rokas A, et al. (2007) What can comparative genomics tell us about species concepts in the genus Aspergillus? Stud Mycol 59:11-7
|
| Kobayashi T, Abe K, Asai K, Gomi K, Juvvadi PR, Kato M, Kitamoto K, Takeuchi M, Machida M | Kobayashi T, et al. (2007) Genomics of Aspergillus oryzae. Biosci Biotechnol Biochem 71(3):646-70
|
| Abe K, Gomi K, Hasegawa F, Machida M | Abe K, et al. (2006) Impact of Aspergillus oryzae genomics on industrial production of metabolites. Mycopathologia 162(3):143-53
|
| Tsuboi H, Koda A, Toda T, Minetoki T, Hirotsune M, Machida M | Tsuboi H, et al. (2005) Improvement of the Aspergillus oryzae enolase promoter (P-enoA) by the introduction of cis-element repeats. Biosci Biotechnol Biochem 69(1):206-8
|
| Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, Garcia JL, Garcia MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jimenez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Latge JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Penalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Cordoba S, Rodriguez-Pena JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sanchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW | Nierman WC, et al. (2005) Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438(7071):1151-6
|
| Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G, Kusumoto K, Arima T, Akita O, Kashiwagi Y, Abe K, Gomi K, Horiuchi H, Kitamoto K, Kobayashi T, Takeuchi M, Denning DW, Galagan JE, Nierman WC, Yu J, Archer DB, Bennett JW, Bhatnagar D, Cleveland TE, Fedorova ND, Gotoh O, Horikawa H, Hosoyama A, Ichinomiya M, Igarashi R, Iwashita K, Juvvadi PR, Kato M, Kato Y, Kin T, Kokubun A, Maeda H, Maeyama N, Maruyama J, Nagasaki H, Nakajima T, Oda K, Okada K, Paulsen I, Sakamoto K, Sawano T, Takahashi M, Takase K, Terabayashi Y, Wortman JR, Yamada O, Yamagata Y, Anazawa H, Hata Y, Koide Y, Komori T, Koyama Y, Minetoki T, Suharnan S, Tanaka A, Isono K, Kuhara S, Ogasawara N, Kikuchi H | Machida M, et al. (2005) Genome sequencing and analysis of Aspergillus oryzae. Nature 438(7071):1157-61
|
| Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S, Lee SI, Basturkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Penalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW | Galagan JE, et al. (2005) Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438(7071):1105-15
|
| Maeda H, Sano M, Maruyama Y, Tanno T, Akao T, Totsuka Y, Endo M, Sakurada R, Yamagata Y, Machida M, Akita O, Hasegawa F, Abe K, Gomi K, Nakajima T, Iguchi Y | Maeda H, et al. (2004) Transcriptional analysis of genes for energy catabolism and hydrolytic enzymes in the filamentous fungus Aspergillus oryzae using cDNA microarrays and expressed sequence tags. Appl Microbiol Biotechnol 65(1):74-83
|
| Machida M | Machida M (2002) Progress of Aspergillus oryzae genomics. Adv Appl Microbiol 51:81-106
|
| Kunihiro S, Kawanishi Y, Sano M, Naito K, Matsuura Y, Tateno Y, Gojobori T, Yamagata Y, Abe K, Machida M | Kunihiro S, et al. (2002) A polymerase chain reaction-based method for cloning novel members of a gene family using a combination of degenerate and inhibitory primers. Gene 289(1-2):177-84
|
| Toda T, Sano M, Honda M, Rimoldi OJ, Yang Y, Yamamoto M, Takase K, Hirozumi K, Kitamoto K, Minetoki T, Gomi K, Machida M | Toda T, et al. (2001) Deletion analysis of the enolase gene (enoA) promoter from the filamentous fungus Aspegillus oryzae. Curr Genet 40(4):260-7
|
| Sano M, Nakajima K, Takase K, Yamamoto M, Machida M | Sano M, et al. (2000) Molecular cloning of genomic DNA for fructose-1,6-bisphosphatase. From Aspergillus oryzae. Biosci Biotechnol Biochem 64(8):1747-50
|
| Nakajima K, Chang YC, Suzuki T, Jigami Y, Machida M | Nakajima K, et al. (2000) Molecular cloning and characterization of rpbA encoding RNA polymerase II largest subunit from a filamentous fungus, Aspergillus oryzae. Biosci Biotechnol Biochem 64(3):641-6
|
| Nakajima K, Kunihiro S, Sano M, Zhang Y, Eto S, Chang YC, Suzuki T, Jigami Y, Machida M | Nakajima K, et al. (2000) Comprehensive cloning and expression analysis of glycolytic genes from the filamentous fungus, Aspergillus oryzae. Curr Genet 37(5):322-7
|
| Honda M, Minetoki T, Gomi K, Machida M | Honda M, et al. (2000) Rapid detection of homologously integrated DNA fragments and accurate quantitation of their copy number in transgenic Aspergillus oryzae by PCR. J Biosci Bioeng 90(5):577-9
|
| Hirozumi K, Nakajima H, Machida M, Yamaguchi M, Takeo K, Kitamoto K | Hirozumi K, et al. (1999) Cloning and characterization of a gene (arpA) from Aspergillus oryzae encoding an actin-related protein required for normal nuclear distribution and morphology of conidiophores. Mol Gen Genet 262(4-5):758-67
|
| Machida M, Gonzalez TV, Boon LK, Gomi K, Jigami Y | Machida M, et al. (1996) Molecular cloning of a genomic DNA for enolase from Aspergillus oryzae. Biosci Biotechnol Biochem 60(1):161-3
|
| Machida M, Chang YC, Manabe M, Yasukawa M, Kunihiro S, Jigami Y | Machida M, et al. (1996) Molecular cloning of a cDNA encoding enolase from the filamentous fungus, Aspergillus oryzae. Curr Genet 30(5):423-31
|
Return to AspGD