AspGD Curated Papers

Author(s)	Citation
Czaja W, Miller KY, Skinner MK, Miller BL	*Czaja W, et al.* (2014)** Structural and functional conservation of fungal MatA and human SRY sex-determining proteins. Nat Commun 5:5434
Czaja W, Miller KY, Miller BL	*Czaja W, et al.* (2013)** Novel sexual-cycle-specific gene silencing in Aspergillus nidulans. Genetics 193(4):1149-62
Czaja W, Miller KY, Miller BL	*Czaja W, et al.* (2011)** Complex mechanisms regulate developmental expression of the matA (HMG) mating type gene in homothallic Aspergillus nidulans. Genetics 189(3):795-808
Pyrzak W, Miller KY, Miller BL	*Pyrzak W, et al.* (2008)** Mating type protein Mat1-2 from asexual Aspergillus fumigatus drives sexual reproduction in fertile Aspergillus nidulans. Eukaryot Cell 7(6):1029-40
Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, Garcia JL, Garcia MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jimenez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Latge JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Penalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Cordoba S, Rodriguez-Pena JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sanchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW	*Nierman WC, et al.* (2005)** Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438(7071):1151-6
Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S, Lee SI, Basturkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Penalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW	*Galagan JE, et al.* (2005)** Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438(7071):1105-15
Zhang MY, Huang NN, Clawson GA, Osmani SA, Pan W, Xin P, Razzaque MS, Miller BA	*Zhang MY, et al.* (2002)** Involvement of the fungal nuclear migration gene nudC human homolog in cell proliferation and mitotic spindle formation. Exp Cell Res 273(1):73-84
Castiglioni Pascon R, Pizzirani-Kleiner AA, Miller BL	*Castiglioni Pascon R, et al.* (2001)** The Aspergillus nidulans bncA1 mutation causes defects in the cell division cycle, nuclear movement and developmental morphogenesis. Mol Gen Genet 264(5):546-54
Vallim MA, Miller KY, Miller BL	*Vallim MA, et al.* (2000)** Aspergillus SteA (sterile12-like) is a homeodomain-C2/H2-Zn+2 finger transcription factor required for sexual reproduction. Mol Microbiol 36(2):290-301
Pascon RC, Miller BL	Pascon RC and Miller BL (2000) Morphogenesis in Aspergillus nidulans requires Dopey (DopA), a member of a novel family of leucine zipper-like proteins conserved from yeast to humans. Mol Microbiol 36(6):1250-64
Gocke CD, Reaman GH, Stine C, Zhang MY, Osmani SA, Miller BA	*Gocke CD, et al.* (2000)** The nuclear migration gene NudC and human hematopoiesis. Leuk Lymphoma 39(5-6):447-54
Gocke CD, Osmani SA, Miller BA	*Gocke CD, et al.* (2000)** The human homologue of the Aspergillus nuclear migration gene nudC is preferentially expressed in dividing cells and ciliated epithelia. Histochem Cell Biol 114(4):293-301
Stephens KE, Miller KY, Miller BL	*Stephens KE, et al.* (1999)** Functional analysis of DNA sequences required for conidium-specific expression of the SpoC1-C1C gene of Aspergillus nidulans. Fungal Genet Biol 27(2-3):231-42
Miller BA, Zhang MY, Gocke CD, De Souza C, Osmani AH, Lynch C, Davies J, Bell L, Osmani SA	*Miller BA, et al.* (1999)** A homolog of the fungal nuclear migration gene nudC is involved in normal and malignant human hematopoiesis. Exp Hematol 27(4):742-50
Wu J, Miller BL	Wu J and Miller BL (1997) Aspergillus asexual reproduction and sexual reproduction are differentially affected by transcriptional and translational mechanisms regulating stunted gene expression. Mol Cell Biol 17(10):6191-201
Dutton JR, Johns S, Miller BL	*Dutton JR, et al.* (1997)** StuAp is a sequence-specific transcription factor that regulates developmental complexity in Aspergillus nidulans. EMBO J 16(18):5710-21
Busby TM, Miller KY, Miller BL	*Busby TM, et al.* (1996)** Suppression and enhancement of the Aspergillus nidulans medusa mutation by altered dosage of the bristle and stunted genes. Genetics 143(1):155-63
Miller BL	Miller BL (1993) Brushing up on bristles: complex genes and morphogenesis in molds. Trends Genet 9(9):293-5
Miller KY, Wu J, Miller BL	*Miller KY, et al.* (1992)** StuA is required for cell pattern formation in Aspergillus. Genes Dev 6(9):1770-82
Miller KY, Toennis TM, Adams TH, Miller BL	*Miller KY, et al.* (1991)** Isolation and transcriptional characterization of a morphological modifier: the Aspergillus nidulans stunted (stuA) gene. Mol Gen Genet 227(2):285-92
Edwards AR, Miller KY, Miller BL	*Edwards AR, et al.* (1990)** Nucleotide and amino acid sequences of the conidium-specific SpoC1-C1D gene from Aspergillus nidulans. Nucleic Acids Res 18(21):6448
Miller BL, Miller KY, Roberti KA, Timberlake WE	*Miller BL, et al.* (1987)** Position-dependent and -independent mechanisms regulate cell-specific expression of the SpoC1 gene cluster of Aspergillus nidulans. Mol Cell Biol 7(1):427-34
Miller BL, Miller KY, Timberlake WE	*Miller BL, et al.* (1985)** Direct and indirect gene replacements in Aspergillus nidulans. Mol Cell Biol 5(7):1714-21
Gwynne DI, Miller BL, Miller KY, Timberlake WE	*Gwynne DI, et al.* (1984)** Structure and regulated expression of the SpoC1 gene cluster from Aspergillus nidulans. J Mol Biol 180(1):91-109

Author(s)

Citation

Czaja W, Miller KY, Skinner MK, Miller BL

Czaja W, et al. (2014) Structural and functional conservation of fungal MatA and human SRY sex-determining proteins. Nat Commun 5:5434

Czaja W, Miller KY, Miller BL

Czaja W, et al. (2013) Novel sexual-cycle-specific gene silencing in Aspergillus nidulans. Genetics 193(4):1149-62

Czaja W, Miller KY, Miller BL

Czaja W, et al. (2011) Complex mechanisms regulate developmental expression of the matA (HMG) mating type gene in homothallic Aspergillus nidulans. Genetics 189(3):795-808

Pyrzak W, Miller KY, Miller BL

Pyrzak W, et al. (2008) Mating type protein Mat1-2 from asexual Aspergillus fumigatus drives sexual reproduction in fertile Aspergillus nidulans. Eukaryot Cell 7(6):1029-40

Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, Davies R, Dyer PS, Farman M, Fedorova N, Fedorova N, Feldblyum TV, Fischer R, Fosker N, Fraser A, Garcia JL, Garcia MJ, Goble A, Goldman GH, Gomi K, Griffith-Jones S, Gwilliam R, Haas B, Haas H, Harris D, Horiuchi H, Huang J, Humphray S, Jimenez J, Keller N, Khouri H, Kitamoto K, Kobayashi T, Konzack S, Kulkarni R, Kumagai T, Lafon A, Latge JP, Li W, Lord A, Lu C, Majoros WH, May GS, Miller BL, Mohamoud Y, Molina M, Monod M, Mouyna I, Mulligan S, Murphy L, O'Neil S, Paulsen I, Penalva MA, Pertea M, Price C, Pritchard BL, Quail MA, Rabbinowitsch E, Rawlins N, Rajandream MA, Reichard U, Renauld H, Robson GD, Rodriguez de Cordoba S, Rodriguez-Pena JM, Ronning CM, Rutter S, Salzberg SL, Sanchez M, Sanchez-Ferrero JC, Saunders D, Seeger K, Squares R, Squares S, Takeuchi M, Tekaia F, Turner G, Vazquez de Aldana CR, Weidman J, White O, Woodward J, Yu JH, Fraser C, Galagan JE, Asai K, Machida M, Hall N, Barrell B, Denning DW

Nierman WC, et al. (2005) Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438(7071):1151-6

Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S, Lee SI, Basturkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Penalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW

Galagan JE, et al. (2005) Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438(7071):1105-15

Zhang MY, Huang NN, Clawson GA, Osmani SA, Pan W, Xin P, Razzaque MS, Miller BA

Zhang MY, et al. (2002) Involvement of the fungal nuclear migration gene nudC human homolog in cell proliferation and mitotic spindle formation. Exp Cell Res 273(1):73-84

Castiglioni Pascon R, Pizzirani-Kleiner AA, Miller BL

Castiglioni Pascon R, et al. (2001) The Aspergillus nidulans bncA1 mutation causes defects in the cell division cycle, nuclear movement and developmental morphogenesis. Mol Gen Genet 264(5):546-54

Vallim MA, Miller KY, Miller BL

Vallim MA, et al. (2000) Aspergillus SteA (sterile12-like) is a homeodomain-C2/H2-Zn+2 finger transcription factor required for sexual reproduction. Mol Microbiol 36(2):290-301

Pascon RC, Miller BL

Pascon RC and Miller BL (2000) Morphogenesis in Aspergillus nidulans requires Dopey (DopA), a member of a novel family of leucine zipper-like proteins conserved from yeast to humans. Mol Microbiol 36(6):1250-64

Gocke CD, Reaman GH, Stine C, Zhang MY, Osmani SA, Miller BA

Gocke CD, et al. (2000) The nuclear migration gene NudC and human hematopoiesis. Leuk Lymphoma 39(5-6):447-54

Gocke CD, Osmani SA, Miller BA

Gocke CD, et al. (2000) The human homologue of the Aspergillus nuclear migration gene nudC is preferentially expressed in dividing cells and ciliated epithelia. Histochem Cell Biol 114(4):293-301

Stephens KE, Miller KY, Miller BL

Stephens KE, et al. (1999) Functional analysis of DNA sequences required for conidium-specific expression of the SpoC1-C1C gene of Aspergillus nidulans. Fungal Genet Biol 27(2-3):231-42

Miller BA, Zhang MY, Gocke CD, De Souza C, Osmani AH, Lynch C, Davies J, Bell L, Osmani SA

Miller BA, et al. (1999) A homolog of the fungal nuclear migration gene nudC is involved in normal and malignant human hematopoiesis. Exp Hematol 27(4):742-50

Wu J, Miller BL

Wu J and Miller BL (1997) Aspergillus asexual reproduction and sexual reproduction are differentially affected by transcriptional and translational mechanisms regulating stunted gene expression. Mol Cell Biol 17(10):6191-201

Dutton JR, Johns S, Miller BL

Dutton JR, et al. (1997) StuAp is a sequence-specific transcription factor that regulates developmental complexity in Aspergillus nidulans. EMBO J 16(18):5710-21

Busby TM, Miller KY, Miller BL

Busby TM, et al. (1996) Suppression and enhancement of the Aspergillus nidulans medusa mutation by altered dosage of the bristle and stunted genes. Genetics 143(1):155-63

Miller BL

Miller BL (1993) Brushing up on bristles: complex genes and morphogenesis in molds. Trends Genet 9(9):293-5

Miller KY, Wu J, Miller BL

Miller KY, et al. (1992) StuA is required for cell pattern formation in Aspergillus. Genes Dev 6(9):1770-82

Miller KY, Toennis TM, Adams TH, Miller BL

Miller KY, et al. (1991) Isolation and transcriptional characterization of a morphological modifier: the Aspergillus nidulans stunted (stuA) gene. Mol Gen Genet 227(2):285-92

Edwards AR, Miller KY, Miller BL

Edwards AR, et al. (1990) Nucleotide and amino acid sequences of the conidium-specific SpoC1-C1D gene from Aspergillus nidulans. Nucleic Acids Res 18(21):6448

Miller BL, Miller KY, Roberti KA, Timberlake WE

Miller BL, et al. (1987) Position-dependent and -independent mechanisms regulate cell-specific expression of the SpoC1 gene cluster of Aspergillus nidulans. Mol Cell Biol 7(1):427-34

Miller BL, Miller KY, Timberlake WE

Miller BL, et al. (1985) Direct and indirect gene replacements in Aspergillus nidulans. Mol Cell Biol 5(7):1714-21

Gwynne DI, Miller BL, Miller KY, Timberlake WE

Gwynne DI, et al. (1984) Structure and regulated expression of the SpoC1 gene cluster from Aspergillus nidulans. J Mol Biol 180(1):91-109

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To cite AspGD, please use the following reference: Cerqueira GC, Arnaud MB, Inglis DO, Skrzypek MS, Binkley G, Simison M, Miyasato SR, Binkley J, Orvis J, Shah P, Wymore F, Sherlock G, Wortman JR (2014). The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations. Nucleic Acids Res 42 (1); D705-10; see How to cite AspGD.