Index of /download/chromosomal_feature_files/A_oryzae_RIB40
Name Last modified Size Description
Parent Directory -
A_oryzae_RIB40_current_chromosomal_feature.tab 13-Mar-2016 07:17 2.9M
A_oryzae_RIB40_version_s01-m09-r04_chromosomal_feature.tab 13-Mar-2016 07:17 2.9M
archive/ 13-Mar-2016 07:17 -
latest.gz 20-Jan-2013 11:01 573K
The files in this directory contain information about chromosomal
features for Aspergillus oryzae RIB40/ATCC 42149.
The notation "version_sXX-mYY-rZZ" in the filename indicates the genome version
to which data in the file corresponds. Detailed explanation about the genome
version notation can be found at: http://www.aspgd.org/help/SequenceHelp.shtml#Anids_versions
Information pertaining to each version update for A. oryzae RIB40/ATCC 42149 can be found at:
The file with "current" in its names is provided as a stable filename for
automated downloads. It is identical to (technically, symbolic links to) the
corresponding versioned file.
This file is updated weekly:
Columns within chromosomal_features.tab:
1. Feature name (mandatory); this is the primary name
2. Gene name (locus name), if available
3. Aliases (multiples separated by |)
4. Feature type
6. Start Coordinate
7. Stop Coordinate
9. Primary AspGDID
10. Secondary AspGDID (if any)
12. Date Created
13. Sequence Coordinate Version Date (if any)
16. Date of gene name reservation (if any).
17. Has the reserved gene name become the standard name? (Y/N)
18. Name of S. cerevisiae ortholog(s) (multiples separated by |)
Note: Genes that have been deleted from the current reference annotation
set are not included in this file.
Funding: grant RO1 AI077599 from the NIAID at the NIH.