Index of /download/gff/A_niger_CBS_513_88
Name Last modified Size Description
Parent Directory -
A_niger_CBS_513_88_current_features.gff 02-Feb-2020 07:26 20M
A_niger_CBS_513_88_current_features.gtf 02-Feb-2020 07:26 9.3M
A_niger_CBS_513_88_current_features_with_chromosome_sequences.gff.gz 02-Feb-2020 07:26 12M
A_niger_CBS_513_88_current_intergenic.gff 02-Feb-2020 07:27 2.8M
A_niger_CBS_513_88_gaps.gff 17-Aug-2011 15:03 29K
A_niger_CBS_513_88_version_s01-m07-r13_features.gff 02-Feb-2020 07:26 20M
A_niger_CBS_513_88_version_s01-m07-r13_features.gtf 02-Feb-2020 07:26 9.3M
A_niger_CBS_513_88_version_s01-m07-r13_features_with_chromosome_sequences.gff.gz 02-Feb-2020 07:26 12M
A_niger_CBS_513_88_version_s01-m07-r13_intergenic.gff 02-Feb-2020 07:27 2.8M
archive/ 02-Feb-2020 07:26 -
This directory contains the downloadable AspGD files in the Generic
Feature Format (GFF). These files describe features in AspGD, including
chromosomes, ORFs, CDSs, introns, sequence gaps, intergenic regions, etc.
Please see http://www.sequenceontology.org/gff3.shtml for a detailed description
of the Generic Feature Format (GFF).
The notation "version_sXX-mYY-rZZ" in the filenames indicates the genome version
to which data in the file corresponds. Detailed explanation about the genome
version notation can be found at: http://www.aspgd.org/help/SequenceHelp.shtml#Anids_versions
Information pertaining to each version update for A. niger CBS 513.88 can be found at:
GFF files with "current" in their names are provided as stable filenames for
automated downloads. They are identical to (technically, symbolic links to) the
corresponding versioned files.
GFF files for previous genome versions are available in the archive sub-directory.
The following files are updated weekly:
This file contains the current AspGD annotation of the A. niger genome sequence.
This file contains the current AspGD annotation and the current genomic sequence
of all chromosomes of the genome sequence. The annotations in this file and the
previous file are the same. The chromosome sequences are specified
in the "##FASTA" section at the end of this file according to GFF3 file format
specifications (see http://www.sequenceontology.org/gff3.shtml).
This file lists the intergenic regions between coding regions in the
chromosomes. This file also contains lengths of these intergenic sequences
and GC and AT content of each intergenic region (percent GC and percent AT).
The following file is not updated:
This file contains the coordinates of gapped regions in the genome
assembly annotated by GenBank.