The download/go/ directory contains the AspGD Gene Ontology (GO) annotation files. ------------------------------------------------ * gene_association.aspgd.gz -- GO Annotations File gene_association.aspgd contains the Gene Ontology (GO) curation from AspGD. In addition to the GO annotations derived from manual GO curation, this file includes GO term predictions that we make based on orthology. The orthology mappings are described in more detail at: http://www.aspergillusgenome.org/cgi-bin/reference/reference.pl?dbid=ASPL0000164707 The orthology-based GO term predictions are described in more detail at: http://www.aspergillusgenome.org/cgi-bin/reference/reference.pl?dbid=ASPL0000000005 Please note that this file contains ALL of the AspGD GO curation, whereas the gene_association file that is available on the GO consortium (GOC) web site (ftp://ftp.geneontology.org/pub/go/gene-associations/submission/gene_association.aspgd.gz), has been filtered according to GOC guidelines. The file contains curation for current ORFs only. This file is regularly updated every week. Previous versions of the gene_association.aspgd.gz file may be retrieved from the CVS version control system at GOC. Instructions on how to access the GO CVS repository can be found at: ftp://ftp.geneontology.org/pub/go/www/GO.CVS.help.shtml * gene_association_README.txt This README explains in detail the contents and format of the gene_association.aspgd file. Please note that the file that previously contained predicted annotations for A. fumigatus, gene_association.A_fumigatus_Af293.gz, has been superseded by information in the gene_association.aspgd file. ------------------------------------------------ /go_slim/ This directory contains files related to Aspergillus GO Slim. ------------------------------------------------